RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 HCN2Q9UL51 889 aa3.24□□□□□ -1.89
CSMD3-202ENST00000339701 HSPB11Q9Y547 144 aa3.24□□□□□ -1.89
CSMD3-202ENST00000339701 NLRC5Q86WI3 1866 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 HYKKA2RU49 373 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 TMEM221A6NGB7 291 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 M0R296 226 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 CDC40O60508 579 aaKnown RBP eCLIP3.23□□□□□ -1.89
CSMD3-202ENST00000339701 INSRRP14616 1297 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 UCHL3P15374 230 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 SIM1P81133 766 aaPredicted RBP3.23□□□□□ -1.89
CSMD3-202ENST00000339701 SLC25A3Q00325 362 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 ECT2LQ008S8 904 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 BCL2L1Q07817 233 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 BOP1Q14137 746 aaKnown RBP3.23□□□□□ -1.89
CSMD3-202ENST00000339701 SQLEQ14534 574 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 USP10Q14694 798 aaKnown RBP3.23□□□□□ -1.89
CSMD3-202ENST00000339701 SGCBQ16585 318 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 LY6KQ17RY6 165 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 LYRM7Q5U5X0 104 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 TPGS2Q68CL5 300 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 FAM180AQ6UWF9 173 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 CREB3L2Q70SY1 520 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 ABCA7Q8IZY2 2146 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 DTX3Q8N9I9 347 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 WFIKKN2Q8TEU8 576 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 ART5Q96L15 291 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 FBXL18Q96ME1 805 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 ZNF670Q9BS34 389 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 PHF7Q9BWX1 381 aaPredicted RBP3.23□□□□□ -1.89
CSMD3-202ENST00000339701 RTFDC1Q9BY42 306 aaPredicted RBP3.23□□□□□ -1.89
CSMD3-202ENST00000339701 FOLH1BQ9HBA9 442 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 MORF4L1Q9UBU8 362 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 THADAQ6YHU6 1953 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 A0A087X0B3 334 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 MEGF11A6BM72 1044 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 E9PBE3 544 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 MKRN2OSH3BPM6 223 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 FANCGO15287 622 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 ZBTB14O43829 449 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 KCNJ13O60928 360 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 RPLP0P05388 317 aaKnown RBP3.23□□□□□ -1.89
CSMD3-202ENST00000339701 EFNA1P20827 205 aaPredicted RBP3.23□□□□□ -1.89
CSMD3-202ENST00000339701 GLRBP48167 497 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 SULT1E1P49888 294 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 CBLBQ13191 982 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 MFSD13AQ14CX5 517 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 PDK4Q16654 411 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 COQ5Q5HYK3 327 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 DCST1Q5T197 706 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 FAM102AQ5T9C2 384 aaPredicted RBP3.23□□□□□ -1.89
CSMD3-202ENST00000339701 COL13A1Q5TAT6 717 aaPredicted RBP3.23□□□□□ -1.89
CSMD3-202ENST00000339701 ARHGAP11AQ6P4F7 1023 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 KLHL17Q6TDP4 642 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 FUKQ8N0W3 1084 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 METTL25Q8N6Q8 603 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 VGLL2Q8N8G2 317 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 SLAMF9Q96A28 289 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 ZFYVE19Q96K21 471 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 RTKNQ9BST9 563 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 KCNH6Q9H252 994 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 ITM2CQ9NQX7 267 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 MTMR4Q9NYA4 1195 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 GNPTGQ9UJJ9 305 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 KCND3Q9UK17 655 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 TRPM6Q9BX84 2022 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 KLRG2A4D1S0 409 aaPredicted RBP3.23□□□□□ -1.89
CSMD3-202ENST00000339701 PALMO75781 387 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 RAB36O95755 333 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 CLIC3O95833 236 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 ITGB3P05106 788 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 FGF1P05230 155 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 ACVR2AP27037 513 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 CD52P31358 61 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 TOB1P50616 345 aaPredicted RBP3.23□□□□□ -1.89
CSMD3-202ENST00000339701 C2orf54Q08AI8 447 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 KCNMA1Q12791 1236 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 PGS1Q32NB8 556 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 PTCHD3Q3KNS1 767 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 SLC22A10Q63ZE4 541 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 HGSNATQ68CP4 663 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 ANKS1BQ7Z6G8 1248 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 CCDC71Q8IV32 467 aaPredicted RBP3.23□□□□□ -1.89
CSMD3-202ENST00000339701 ADAMTS18Q8TE60 1221 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 TRIB2Q92519 343 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 PHYHIPQ92561 330 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 UCN3Q969E3 161 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 KLHDC7BQ96G42 594 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 WDR18Q9BV38 432 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 C1orf21Q9H246 121 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 ADAMTS10Q9H324 1103 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 DERAQ9Y315 318 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 FAM221BA6H8Z2 402 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 SYN3O14994 580 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 SEC24AO95486 1093 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 LBPP18428 481 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 ATP5A1P25705 553 aaKnown RBP3.23□□□□□ -1.89
CSMD3-202ENST00000339701 GKP32189 559 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 CCR10P46092 362 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 CD151P48509 253 aa3.23□□□□□ -1.89
CSMD3-202ENST00000339701 PTDSS1P48651 473 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms