RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 C1orf189Q5VU69 101 aa18.8■□□□□ 0.6
ITGA4-202ENST00000339307 ETNK1Q9HBU6 452 aa18.8■□□□□ 0.6
ITGA4-202ENST00000339307 MAP10Q9P2G4 905 aa18.8■□□□□ 0.6
ITGA4-202ENST00000339307 SLC2A6Q9UGQ3 507 aa18.8■□□□□ 0.6
ITGA4-202ENST00000339307 GOLGA6L6A8MZA4 724 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 F8W8V4 182 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 KDM1AO60341 852 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 OR1I1O60431 355 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 GOT2P00505 430 aaKnown RBP18.79■□□□□ 0.6
ITGA4-202ENST00000339307 CHRM5P08912 532 aaPredicted RBP18.79■□□□□ 0.6
ITGA4-202ENST00000339307 SPTBP11277 2137 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 STIP1P31948 543 aaKnown RBP18.79■□□□□ 0.6
ITGA4-202ENST00000339307 FOXN2P32314 431 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 LYPLAL1Q5VWZ2 237 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 TBC1D21Q8IYX1 336 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 FAM26EQ8N5C1 309 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 CFAP61Q8NHU2 1237 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 CPT1CQ8TCG5 803 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 C1orf54Q8WWF1 131 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 TCTN2Q96GX1 697 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 HES6Q96HZ4 224 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 MFRPQ9BY79 579 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 SPRTNQ9H040 489 aaPredicted RBP18.79■□□□□ 0.6
ITGA4-202ENST00000339307 FAM60AQ9NP50 221 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 SPHK1Q9NYA1 384 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 PADI2Q9Y2J8 665 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 PCDHGA9Q9Y5G4 932 aaKnown RBP18.79■□□□□ 0.6
ITGA4-202ENST00000339307 CAPN6Q9Y6Q1 641 aa18.79■□□□□ 0.6
ITGA4-202ENST00000339307 ERI2A8K979 691 aaKnown RBP18.78■□□□□ 0.6
ITGA4-202ENST00000339307 FDFT1P37268 417 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 PRAMEP78395 509 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 RAPSNQ13702 412 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 NCF4Q15080 339 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 KYNUQ16719 465 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 FASTKD1Q53R41 847 aaKnown RBP18.78■□□□□ 0.6
ITGA4-202ENST00000339307 AFTPHQ6ULP2 937 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 FAM198BQ6UWH4 519 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 PACS1Q6VY07 963 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 PRUNE1Q86TP1 453 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 CCDC89Q8N998 374 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 OR5K2Q8NHB8 316 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 ADAMTS17Q8TE56 1095 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 OR2A14Q96R47 310 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 DPH2Q9BQC3 489 aaPredicted RBP18.78■□□□□ 0.6
ITGA4-202ENST00000339307 RAB6BQ9NRW1 208 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 LUZP4Q9P127 313 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 ANAPC5Q9UJX4 755 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 ZNF451Q9Y4E5 1061 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 PIKFYVEQ9Y2I7 2098 aa18.78■□□□□ 0.6
ITGA4-202ENST00000339307 A0A0J9YY10 115 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 BHMG1C9JSJ3 638 aaPredicted RBP18.77■□□□□ 0.6
ITGA4-202ENST00000339307 LIASO43766 372 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 MSL3P1P0C860 447 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 ACADLP28330 430 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 PPARGP37231 505 aaPredicted RBP18.77■□□□□ 0.6
ITGA4-202ENST00000339307 GRIA1P42261 906 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 RRADP55042 308 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 PLOD1Q02809 727 aaPredicted RBP18.77■□□□□ 0.6
ITGA4-202ENST00000339307 HSPA14Q0VDF9 509 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 ATP1A4Q13733 1029 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 TSTD2Q5T7W7 516 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 RAB43Q86YS6 212 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 TMEM139Q8IV31 216 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 C2orf73Q8N5S3 287 aaPredicted RBP18.77■□□□□ 0.6
ITGA4-202ENST00000339307 ZBTB2Q8N680 514 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 FDCSPQ8NFU4 85 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 OR13J1Q8NGT2 312 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 OR4L1Q8NH43 312 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 SGSM3Q96HU1 749 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 TSSK1BQ9BXA7 367 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 TXLNGQ9NUQ3 528 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 OR6C2Q9NZP2 312 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 CIDEBQ9UHD4 219 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 GUCA1BQ9UMX6 200 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 AP1M2Q9Y6Q5 423 aa18.77■□□□□ 0.6
ITGA4-202ENST00000339307 SLC5A10A0PJK1 596 aa18.76■□□□□ 0.59
ITGA4-202ENST00000339307 CAPN1P07384 714 aa18.76■□□□□ 0.59
ITGA4-202ENST00000339307 CBSLP0DN79 551 aa18.76■□□□□ 0.59
ITGA4-202ENST00000339307 ETS1P14921 441 aa18.76■□□□□ 0.59
ITGA4-202ENST00000339307 ADRA1DP25100 572 aa18.76■□□□□ 0.59
ITGA4-202ENST00000339307 CBSP35520 551 aa18.76■□□□□ 0.59
ITGA4-202ENST00000339307 SRSF1Q07955 248 aaKnown RBP eCLIP18.76■□□□□ 0.59
ITGA4-202ENST00000339307 SLC9A5Q14940 896 aa18.76■□□□□ 0.59
ITGA4-202ENST00000339307 ZIC1Q15915 447 aa18.76■□□□□ 0.59
ITGA4-202ENST00000339307 MED25Q71SY5 747 aa18.76■□□□□ 0.59
ITGA4-202ENST00000339307 FAM20CQ8IXL6 584 aa18.76■□□□□ 0.59
ITGA4-202ENST00000339307 ZNF655Q8N720 491 aaPredicted RBP18.76■□□□□ 0.59
ITGA4-202ENST00000339307 TMEM102Q8N9M5 508 aaPredicted RBP18.76■□□□□ 0.59
ITGA4-202ENST00000339307 SLAMF7Q9NQ25 335 aa18.76■□□□□ 0.59
ITGA4-202ENST00000339307 IFT80Q9P2H3 777 aaPredicted RBP18.76■□□□□ 0.59
ITGA4-202ENST00000339307 NDOR1Q9UHB4 597 aa18.76■□□□□ 0.59
ITGA4-202ENST00000339307 PTRH2Q9Y3E5 179 aaKnown RBP18.76■□□□□ 0.59
ITGA4-202ENST00000339307 NBASA2RRP1 2371 aa18.76■□□□□ 0.59
ITGA4-202ENST00000339307 DOPEY2Q9Y3R5 2298 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 IQCF5A8MTL0 148 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 HCRTR1O43613 425 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 APRTP07741 180 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 TPBGLP0DKB5 382 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 GNLYP22749 145 aa18.75■□□□□ 0.59
ITGA4-202ENST00000339307 FOLR3P41439 243 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms