RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 TCFL5Q9UL49 500 aa16.49■□□□□ 0.23
VSTM1-201ENST00000338372 PCDHGA9Q9Y5G4 932 aaKnown RBP16.49■□□□□ 0.23
VSTM1-201ENST00000338372 PCM1Q15154 2024 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 NUP210LQ5VU65 1888 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 C2orf74A8MZ97 194 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 GPC4O75487 556 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 KLF7O75840 302 aaPredicted RBP16.48■□□□□ 0.23
VSTM1-201ENST00000338372 GOT2P00505 430 aaKnown RBP16.48■□□□□ 0.23
VSTM1-201ENST00000338372 UGT2B7P16662 529 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 PTGIRP43119 386 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 ITGA1P56199 1179 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 RPS15P62841 145 aaKnown RBP16.48■□□□□ 0.23
VSTM1-201ENST00000338372 CHAF1BQ13112 559 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 TRIM73Q86UV7 250 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 VRK3Q8IV63 474 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 SYTL1Q8IYJ3 562 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 TBC1D21Q8IYX1 336 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 ZBTB2Q8N680 514 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 OR5K2Q8NHB8 316 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 C1orf54Q8WWF1 131 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 CPT1BQ92523 772 aa16.48■□□□□ 0.23
VSTM1-201ENST00000338372 ACTR5Q9H9F9 607 aaPredicted RBP16.48■□□□□ 0.23
VSTM1-201ENST00000338372 DOCK10Q96BY6 2186 aa16.47■□□□□ 0.23
VSTM1-201ENST00000338372 ZNF749O43361 778 aa16.47■□□□□ 0.23
VSTM1-201ENST00000338372 CNOT3O75175 753 aaKnown RBP16.47■□□□□ 0.23
VSTM1-201ENST00000338372 KLK3P07288 261 aaPredicted RBP16.47■□□□□ 0.23
VSTM1-201ENST00000338372 CHRM5P08912 532 aaPredicted RBP16.47■□□□□ 0.23
VSTM1-201ENST00000338372 ADRA1DP25100 572 aa16.47■□□□□ 0.23
VSTM1-201ENST00000338372 CCR7P32248 378 aa16.47■□□□□ 0.23
VSTM1-201ENST00000338372 FDFT1P37268 417 aa16.47■□□□□ 0.23
VSTM1-201ENST00000338372 MLLT10P55197 1068 aa16.47■□□□□ 0.23
VSTM1-201ENST00000338372 BRD3Q15059 726 aa16.47■□□□□ 0.23
VSTM1-201ENST00000338372 DNAJC22Q8N4W6 341 aa16.47■□□□□ 0.23
VSTM1-201ENST00000338372 ELMO1Q92556 727 aa16.47■□□□□ 0.23
VSTM1-201ENST00000338372 LRRC45Q96CN5 670 aa16.47■□□□□ 0.23
VSTM1-201ENST00000338372 AP1M1Q9BXS5 423 aa16.47■□□□□ 0.23
VSTM1-201ENST00000338372 FRMD8P1Q9BZ68 369 aaPredicted RBP16.47■□□□□ 0.23
VSTM1-201ENST00000338372 SPRTNQ9H040 489 aaPredicted RBP16.47■□□□□ 0.23
VSTM1-201ENST00000338372 ING2Q9H160 280 aa16.47■□□□□ 0.23
VSTM1-201ENST00000338372 HEATR9A2RTY3 570 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 QSOX1O00391 747 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 FTH1P02794 183 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 ZSCAN5DPP0CG00 497 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 UBAP2LQ14157 1087 aaKnown RBP16.46■□□□□ 0.23
VSTM1-201ENST00000338372 PTCHD3Q3KNS1 767 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 MEI1Q5TIA1 1274 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 SLC22A15Q8IZD6 547 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 C19orf47Q8N9M1 422 aaKnown RBP16.46■□□□□ 0.23
VSTM1-201ENST00000338372 LINC01555Q8NAE3 123 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 SPC24Q8NBT2 197 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 OR4L1Q8NH43 312 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 PEX13Q92968 403 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 OR6C2Q9NZP2 312 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 MARCH4Q9P2E8 410 aaPredicted RBP16.46■□□□□ 0.23
VSTM1-201ENST00000338372 POLG2Q9UHN1 485 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 SERTAD3Q9UJW9 196 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 ASF1AQ9Y294 204 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 TCAF1Q9Y4C2 921 aa16.46■□□□□ 0.23
VSTM1-201ENST00000338372 ARGFXA6NJG6 315 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 PRICKLE3O43900 615 aaPredicted RBP16.45■□□□□ 0.22
VSTM1-201ENST00000338372 SORBS2O94875 1100 aaKnown RBP16.45■□□□□ 0.22
VSTM1-201ENST00000338372 CBSLP0DN79 551 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 SHMT2P34897 504 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 RPL22P35268 128 aaKnown RBP16.45■□□□□ 0.22
VSTM1-201ENST00000338372 CBSP35520 551 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 NCF4Q15080 339 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 KYNUQ16719 465 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 DRICH1Q6PGQ1 229 aaPredicted RBP16.45■□□□□ 0.22
VSTM1-201ENST00000338372 AFTPHQ6ULP2 937 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 LMNTD1Q8N9Z9 388 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 TEX19Q8NA77 164 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 UBE2Q2Q8WVN8 375 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 COL26A1Q96A83 441 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 CLIP3Q96DZ5 547 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 TCTN2Q96GX1 697 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 GBP5Q96PP8 586 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 CARD6Q9BX69 1037 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 FANCEQ9HB96 536 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 ENAMQ9NRM1 1142 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 TREX1Q9NSU2 369 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 PLAGL1Q9UM63 463 aa16.45■□□□□ 0.22
VSTM1-201ENST00000338372 IQCF5A8MTL0 148 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 E7EQ34 232 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 SLCO2B1O94956 709 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 OR56A5P0C7T3 313 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 AOAHP28039 575 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 PKLRP30613 574 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 CCL11P51671 97 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 PLOD1Q02809 727 aaPredicted RBP16.44■□□□□ 0.22
VSTM1-201ENST00000338372 SNX1Q13596 522 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 SLC5A12Q1EHB4 618 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 DEFB110Q30KQ9 67 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 NADK2Q4G0N4 442 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 LYPLAL1Q5VWZ2 237 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 RHBDD2Q6NTF9 364 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 ZNF449Q6P9G9 518 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 LDB1Q86U70 411 aaPredicted RBP16.44■□□□□ 0.22
VSTM1-201ENST00000338372 FAM20CQ8IXL6 584 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 DNAAF3Q8N9W5 541 aa16.44■□□□□ 0.22
VSTM1-201ENST00000338372 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms