RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 AOAHP28039 575 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 CSNK1DP48730 415 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 GPR33Q49SQ1 333 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 XKR7Q5GH72 579 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 PDE12Q6L8Q7 609 aaKnown RBP12.29□□□□□ -0.44
LIMK1-201ENST00000336180 FAM180BQ6P0A1 224 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 BLOC1S3Q6QNY0 202 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 SUSD1Q6UWL2 747 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 LIPIQ6XZB0 460 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 KIAA2013Q8IYS2 634 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 PHACTR4Q8IZ21 702 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 PIP4K2CQ8TBX8 421 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 BPIFB1Q8TDL5 484 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 SLCO4A1Q96BD0 722 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 TM7SF3Q9NS93 570 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 DEC1Q9P2X7 70 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 K7EPI3 171 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 SAP18O00422 153 aaKnown RBP12.29□□□□□ -0.44
LIMK1-201ENST00000336180 LSM1O15116 133 aaKnown RBP12.29□□□□□ -0.44
LIMK1-201ENST00000336180 LZTS3O60299 673 aaPredicted RBP12.29□□□□□ -0.44
LIMK1-201ENST00000336180 ULK1O75385 1050 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 OTCP00480 354 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 ANXA5P08758 320 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 IDO1P14902 403 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 CLCN2P51788 898 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 ADARP55265 1226 aaKnown RBP12.29□□□□□ -0.44
LIMK1-201ENST00000336180 POLR2LP62875 67 aaKnown RBP12.29□□□□□ -0.44
LIMK1-201ENST00000336180 CDKL1Q00532 357 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 KLC1Q07866 573 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 NAE1Q13564 534 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 ZNF284Q2VY69 593 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 TTLL9Q3SXZ7 439 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 FAM174BQ3ZCQ3 159 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 ZNF805Q5CZA5 627 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 SPANXN4Q5MJ08 99 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 RNF220Q5VTB9 566 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 CFAP206Q8IYR0 622 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 CELF5Q8N6W0 485 aaKnown RBP12.29□□□□□ -0.44
LIMK1-201ENST00000336180 SELENOMQ8WWX9 145 aa12.29□□□□□ -0.44
LIMK1-201ENST00000336180 DFNA5O60443 496 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 RECQL5O94762 991 aaPredicted RBP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 RPS3P23396 243 aaKnown RBP eCLIP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 PRKG2Q13237 762 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 ZNF234Q14588 700 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 DHFR2Q86XF0 187 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 CLEC4FQ8N1N0 589 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 PCYOX1LQ8NBM8 494 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 PLA2G15Q8NCC3 412 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 APOLD1Q96LR9 279 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 ZNF641Q96N77 438 aaPredicted RBP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 IL17FQ96PD4 163 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 ASB2Q96Q27 587 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 CPEB1Q9BZB8 566 aaKnown RBP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 SLC6A13Q9NSD5 602 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 CROCCQ5TZA2 2017 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 GBF1Q92538 1859 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 HIST1H2AGP0C0S8 130 aaPredicted RBP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 HIST1H2ADP20671 130 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 IL12RB1P42701 662 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 ERVK-8P63133 956 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 LIPEQ05469 1076 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 SFSWAPQ12872 951 aaKnown RBP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 STARD3Q14849 445 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 PDSS2Q86YH6 399 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 PDPRQ8NCN5 879 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 GPR156Q8NFN8 814 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 OSCP1Q8WVF1 389 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 JADE3Q92613 823 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 ISG20Q96AZ6 181 aaKnown RBP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 HIST1H2AHQ96KK5 128 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 HIST1H2AJQ99878 128 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 H2AFJQ9BTM1 129 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 TMEM181Q9P2C4 612 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 LRCH1Q9Y2L9 728 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 AP4S1Q9Y587 144 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 PABPN1LA6NDY0 278 aaKnown RBP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 ARHGEF33A8MVX0 844 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 EIF3FO00303 357 aaPredicted RBP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 FSHRP23945 695 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 VARSP26640 1264 aaKnown RBP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 OR4D2P58180 307 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 TMEM115Q12893 351 aaPredicted RBP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 PCBP2Q15366 365 aaKnown RBP eCLIP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 PGS1Q32NB8 556 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 TMEM31Q5JXX7 168 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 EGFLAMQ63HQ2 1017 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 AAGABQ6PD74 315 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 IYDQ6PHW0 289 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 GALNT10Q86SR1 603 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 EME1Q96AY2 570 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 LYSMD1Q96S90 227 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 SLC29A1Q99808 456 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 ACPTQ9BZG2 426 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 SOX17Q9H6I2 414 aaPredicted RBP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 HPS4Q9NQG7 708 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 PAPOLBQ9NRJ5 636 aaKnown RBP12.28□□□□□ -0.44
LIMK1-201ENST00000336180 RIC8BQ9NVN3 520 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 VPS4AQ9UN37 437 aa12.28□□□□□ -0.44
LIMK1-201ENST00000336180 SLC8A2Q9UPR5 921 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms