RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 CLCN4P51793 760 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 NUDT6P53370 316 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 ATXN7L3Q14CW9 347 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 HEPACAMQ14CZ8 416 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 TEAD4Q15561 434 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 USP41Q3LFD5 358 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 FAM174BQ3ZCQ3 159 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 NCEH1Q6PIU2 408 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 CYP2U1Q7Z449 544 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 C12orf29Q8N999 325 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 FAM110BQ8TC76 370 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 DHRS1Q96LJ7 313 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 IL4I1Q96RQ9 567 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 GAS2L1Q99501 681 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 HERC2P3Q9BVR0 1158 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 CFAP97Q9P2B7 532 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF536O15090 1300 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 CLDN5O00501 218 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 KERAO60938 352 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 MAPK8P45983 427 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 RPS3AP61247 264 aaKnown RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 LAPTM5Q13571 262 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 PUM1Q14671 1186 aaKnown RBP eCLIP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 CBX2Q14781 532 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 PRKD1Q15139 912 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 COMTD1Q86VU5 262 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 RANBP3LQ86VV4 465 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 PHTF2Q8N3S3 785 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 ATP6V1C2Q8NEY4 427 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 DNERQ8NFT8 737 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 DPCDQ9BVM2 203 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 PORCNQ9H237 461 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 ENAMQ9NRM1 1142 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 FARSBQ9NSD9 589 aaKnown RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 KCTD5Q9NXV2 234 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 CYTH4Q9UIA0 394 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 STMND1H3BQB6 276 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 MRPS5P82675 430 aaKnown RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 C17orf64Q86WR6 236 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 PDGFDQ9GZP0 370 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 POLR2J3Q9H1A7 115 aaKnown RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 RGCCQ9H4X1 137 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 THG1LQ9NWX6 298 aaKnown RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 EIF2B4Q9UI10 523 aaKnown RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 TET3O43151 1660 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 A0A1B0GVC2 190 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 FAM234BA2RU67 622 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 TVP23AA6NH52 213 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 VAMP1P23763 118 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 NMBRP28336 390 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 CASP9P55211 416 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 BACE1P56817 501 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 MTFR2Q6P444 385 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF773Q6PK81 442 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 PAMR1Q6UXH9 720 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 COMMD7Q86VX2 200 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 OR4K2Q8NGD2 314 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 BSNDQ8WZ55 320 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 SUSD6Q92537 303 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 SMURF2Q9HAU4 748 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 NDUFAF4Q9P032 175 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 IGSF9Q9P2J2 1179 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 SALL3Q9BXA9 1300 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 ABCB7O75027 752 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 STK16O75716 305 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 SLC35G4P0C7Q5 338 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 ANXA8P13928 327 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 APLP1P51693 650 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 IRF9Q00978 393 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 OR5B17Q8NGF7 314 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 AGO3Q9H9G7 860 aaKnown RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 FARSAQ9Y285 508 aaKnown RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 YDJCA8MPS7 323 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 SPARCP09486 303 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 PORP16435 677 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 NT5EP21589 574 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 MAP3K8P41279 467 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 GPD2P43304 727 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 NDUFV1P49821 464 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 MLLT6P55198 1093 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 BTG3Q14201 252 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 TMEM44Q2T9K0 475 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 PLEKHH3Q7Z736 793 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 TIGD4Q8IY51 512 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 C12orf50Q8NA57 414 aaPredicted RBP9.64□□□□□ -0.87
COL4A6-201ENST00000334504 CSPG4P5Q96PW8 444 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 LRRC3Q9BY71 257 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 CDT1Q9H211 546 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 GBA3Q9H227 469 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 TM9SF3Q9HD45 589 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 CTPS2Q9NRF8 586 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 PLEKHA6Q9Y2H5 1048 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 PCDHB1Q9Y5F3 818 aa9.64□□□□□ -0.87
COL4A6-201ENST00000334504 IQSEC2Q5JU85 1478 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 STT3AP46977 705 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 NKX2-5P52952 324 aaPredicted RBP9.63□□□□□ -0.87
COL4A6-201ENST00000334504 TEX44Q53QW1 395 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 CLEC12AQ5QGZ9 265 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 TMEM198Q66K66 360 aa9.63□□□□□ -0.87
COL4A6-201ENST00000334504 FSTL5Q8N475 847 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms