RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ZBTB20Q9HC78 741 aaPredicted RBP13.47□□□□□ -0.25
SYNE3-201ENST00000334258 ZFP14Q9HCL3 533 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 NEU3Q9UQ49 428 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 ASB1Q9Y576 335 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 BPTFQ12830 3046 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 TAF4O00268 1085 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 AIREO43918 545 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 GPR32O75388 356 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 RPP40O75818 363 aaKnown RBP13.47□□□□□ -0.25
SYNE3-201ENST00000334258 KCNK2O95069 426 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 SPNP16150 400 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 PIK3CGP48736 1102 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 ERVPABLB-1P60509 514 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 PON2Q15165 354 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 MILR1Q7Z6M3 343 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 OR8J3Q8NGG0 315 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 APOL4Q9BPW4 351 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 DERL2Q9GZP9 239 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 NAALAD2Q9Y3Q0 740 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 PTCH2Q9Y6C5 1203 aa13.47□□□□□ -0.25
SYNE3-201ENST00000334258 LCHNA4D1U4 455 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 SAGE2PA6NJ88 616 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 HHLA1C9JL84 531 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 NDST3O95803 873 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 PSEN2P49810 448 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 STC1P52823 247 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 FKBP1BP68106 108 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 IHHQ14623 411 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 PLEKHG6Q3KR16 790 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 BRMS1LQ5PSV4 323 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 SYT6Q5T7P8 510 aaPredicted RBP13.46□□□□□ -0.25
SYNE3-201ENST00000334258 CCBE1Q6UXH8 406 aaPredicted RBP13.46□□□□□ -0.25
SYNE3-201ENST00000334258 PRR23CQ6ZRP0 262 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 GATAD2AQ86YP4 633 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 LRRC49Q8IUZ0 686 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 ZNF548Q8NEK5 533 aaPredicted RBP13.46□□□□□ -0.25
SYNE3-201ENST00000334258 SUN5Q8TC36 379 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 FAM120BQ96EK7 910 aaKnown RBP13.46□□□□□ -0.25
SYNE3-201ENST00000334258 KIF17Q9P2E2 1029 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 FBXO10Q9UK96 956 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 CAB39Q9Y376 341 aaPredicted RBP13.46□□□□□ -0.25
SYNE3-201ENST00000334258 HS3ST4Q9Y661 456 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 A0A0G2JMZ2 1700 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 PLXNA1Q9UIW2 1896 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 PDZK1P1A8MUH7 402 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 CREG1O75629 220 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 SCELO95171 688 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 PCSK1P29120 753 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 CCND3P30281 292 aaPredicted RBP13.46□□□□□ -0.25
SYNE3-201ENST00000334258 SLC35A2P78381 396 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 CDC20Q12834 499 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 GTDC1Q4AE62 458 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 LETMD1Q6P1Q0 360 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 DPY30Q9C005 99 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 RNF38Q9H0F5 515 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 ACOT13Q9NPJ3 140 aa13.46□□□□□ -0.25
SYNE3-201ENST00000334258 TMEFF2Q9UIK5 374 aaPredicted RBP13.46□□□□□ -0.25
SYNE3-201ENST00000334258 TRMT6Q9UJA5 497 aaKnown RBP13.46□□□□□ -0.25
SYNE3-201ENST00000334258 PLXNB2O15031 1838 aa13.46□□□□□ -0.26
SYNE3-201ENST00000334258 CASTOR2A6NHX0 329 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 FFAR3O14843 346 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 SLC16A6O15403 523 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 GPR42O15529 346 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 DIRAS1O95057 198 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 PTPN2P17706 415 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 CD6P30203 668 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 CASP3P42574 277 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 CLCNKBP51801 687 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 PHC1P78364 1004 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 IL18R1Q13478 541 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 VARS2Q5ST30 1063 aaKnown RBP13.45□□□□□ -0.26
SYNE3-201ENST00000334258 SPATC1Q76KD6 591 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 SLC22A15Q8IZD6 547 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 ATG16L2Q8NAA4 619 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 CLHC1Q8NHS4 586 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 UBE2FQ969M7 185 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 WDR70Q9NW82 654 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 PKP3Q9Y446 797 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 PCDHGB1Q9Y5G3 927 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 LOC105371267A0A1B0GV96 52 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 ARNTLO00327 626 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 PTGESO14684 152 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 RECQL5O94762 991 aaPredicted RBP13.45□□□□□ -0.26
SYNE3-201ENST00000334258 BMPR1AP36894 532 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 FCGRTP55899 365 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 TPRG1LQ5T0D9 272 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 CYP4Z1Q86W10 505 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 AMER2Q8N7J2 671 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 SIDT2Q8NBJ9 832 aaKnown RBP13.45□□□□□ -0.26
SYNE3-201ENST00000334258 LILRB4Q8NHJ6 448 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 RMDN1Q96DB5 314 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 LINGO1Q96FE5 620 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 REXO5Q96IC2 774 aaKnown RBP13.45□□□□□ -0.26
SYNE3-201ENST00000334258 BARD1Q99728 777 aaKnown RBP13.45□□□□□ -0.26
SYNE3-201ENST00000334258 MMP27Q9H306 513 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 ACTL8Q9H568 366 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 DUSP21Q9H596 190 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 AMBNQ9NP70 447 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 XIRP2A4UGR9 3374 aa13.45□□□□□ -0.26
SYNE3-201ENST00000334258 DEFA1P59665 94 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms