RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TMBIM6P55061 237 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 CBX2Q14781 532 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 PON2Q15165 354 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 CYP2A13Q16696 494 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 SLC16A12Q6ZSM3 486 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 DET1Q7L5Y6 550 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 SERPINA9Q86WD7 417 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 RGL4Q8IZJ4 473 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 LEMD2Q8NC56 503 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 FKBP10Q96AY3 582 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 CCDC138Q96M89 665 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 MYOCQ99972 504 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 TUBA1CQ9BQE3 449 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 ADGRE3Q9BY15 652 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 DNAJB9Q9UBS3 223 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 ZNF490Q9ULM2 529 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 ARIH1Q9Y4X5 557 aaPredicted RBP12.07□□□□□ -0.48
VPS33B-201ENST00000333371 ANGPTL3Q9Y5C1 460 aa12.07□□□□□ -0.48
VPS33B-201ENST00000333371 ELOVL7A1L3X0 281 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 FUOMA2VDF0 154 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 LOC730098B7Z3J9 87 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 FKTNO75072 461 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 BCAS1O75363 584 aaPredicted RBP12.06□□□□□ -0.48
VPS33B-201ENST00000333371 DIRAS1O95057 198 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 SLC25A14O95258 325 aaPredicted RBP12.06□□□□□ -0.48
VPS33B-201ENST00000333371 PRAMEF1O95521 474 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 OTCP00480 354 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 SERPINA1P01009 418 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 JUNBP17275 347 aaPredicted RBP12.06□□□□□ -0.48
VPS33B-201ENST00000333371 IDUAP35475 653 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 SLC11A2P49281 568 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 CLCN4P51793 760 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 SPIDRQ14159 915 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 CXorf57Q6NSI4 855 aaKnown RBP12.06□□□□□ -0.48
VPS33B-201ENST00000333371 ANKS3Q6ZW76 656 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 IGFN1Q86VF2 1251 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 OR8J3Q8NGG0 315 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 PNPT1Q8TCS8 783 aaKnown RBP12.06□□□□□ -0.48
VPS33B-201ENST00000333371 OR52E6Q96RD3 313 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 INPP5KQ9BT40 448 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 TTPALQ9BTX7 342 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 RNF38Q9H0F5 515 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 WWOXQ9NZC7 414 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 TMEM9Q9P0T7 183 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 VPS9D1Q9Y2B5 631 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 PCDHB14Q9Y5E9 798 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 SCN5AQ14524 2016 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 UPK3BL1B0FP48 263 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 UPK3BL2E5RIL1 263 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 TBC1D4O60343 1298 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 CLPXO76031 633 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 STC2O76061 302 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 LRATO95237 230 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 S100BP04271 92 aaPredicted RBP12.06□□□□□ -0.48
VPS33B-201ENST00000333371 GALTP07902 379 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 DCTP40126 519 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 GP2P55259 537 aaKnown RBP12.06□□□□□ -0.48
VPS33B-201ENST00000333371 VAC14Q08AM6 782 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 SMARCB1Q12824 385 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 SLC14A1Q13336 389 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 GPNMBQ14956 572 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 SKIV2LQ15477 1246 aaKnown RBP12.06□□□□□ -0.48
VPS33B-201ENST00000333371 CPSF6Q16630 551 aaKnown RBP eCLIP12.06□□□□□ -0.48
VPS33B-201ENST00000333371 C5orf22Q49AR2 442 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 CRTC3Q6UUV7 619 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 ADAMTSL2Q86TH1 951 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 ZNF555Q8NEP9 628 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 ABHD11Q8NFV4 315 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 SCLYQ96I15 445 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 UGT2B28Q9BY64 529 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 GORASP2Q9H8Y8 452 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 PCDH12Q9NPG4 1184 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 TBCCD1Q9NVR7 557 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 DLGAP4Q9Y2H0 992 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 PKP3Q9Y446 797 aa12.06□□□□□ -0.48
VPS33B-201ENST00000333371 LOC100130705A0A1B0GUX0 176 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 GAPDHSO14556 408 aaPredicted RBP12.05□□□□□ -0.48
VPS33B-201ENST00000333371 RAD51BO15315 384 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 FTH1P02794 183 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 IMPDH2P12268 514 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 GSTM2P28161 218 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 FMO3P31513 532 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 AKT1P31749 480 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 CDKN2CP42773 168 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 NEK2P51955 445 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 ISL1P61371 349 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 PHEXP78562 749 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 SIM2Q14190 667 aaPredicted RBP12.05□□□□□ -0.48
VPS33B-201ENST00000333371 TTC23Q5W5X9 447 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 EGFLAMQ63HQ2 1017 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 LAIR1Q6GTX8 287 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 ADGRG2Q8IZP9 1017 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 RNF175Q8N4F7 328 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 CARNMT1Q8N4J0 409 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 WFDC5Q8TCV5 224 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 RAB2BQ8WUD1 216 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 HDAC2Q92769 488 aaKnown RBP12.05□□□□□ -0.48
VPS33B-201ENST00000333371 SPATA17Q96L03 361 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 CLPBQ9H078 707 aa12.05□□□□□ -0.48
VPS33B-201ENST00000333371 RAD21L1Q9H4I0 556 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms