RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 NELFEP18615 380 aaKnown RBP13.6□□□□□ -0.23
LIMS1-201ENST00000332345 ATP5DP30049 168 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 SKIV2L2P42285 1042 aaKnown RBP13.6□□□□□ -0.23
LIMS1-201ENST00000332345 CLCN7P51798 805 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 MPP1Q00013 466 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 TEDDM1Q5T9Z0 273 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 ZNF549Q6P9A3 640 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 CNSTQ6PJW8 725 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 CEACAM20Q6UY09 585 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 GALNT7Q86SF2 657 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 CTAGE6Q86UF2 777 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 CTAGE4Q8IX94 777 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 MMGT1Q8N4V1 131 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 ZBTB2Q8N680 514 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 BMPERQ8N8U9 685 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 KCNE4Q8WWG9 221 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 INPP5DQ92835 1189 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 FAM136AQ96C01 138 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 MAP3K3Q99759 626 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 XKR8Q9H6D3 395 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 SAYSD1Q9NPB0 183 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 C1GALT1Q9NS00 363 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 ACSL6Q9UKU0 697 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 DHRS7Q9Y394 339 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 PCDHB11Q9Y5F2 797 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 IGHV5-51A0A0C4DH38 117 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 PIPSLA2A3N6 862 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 BTN3A3O00478 584 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 BTN3A1O00481 513 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 VPS26AO75436 327 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 ZBTB11O95625 1053 aaPredicted RBP13.59□□□□□ -0.23
LIMS1-201ENST00000332345 CDH3P22223 829 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 PRDX3P30048 256 aaKnown RBP13.59□□□□□ -0.23
LIMS1-201ENST00000332345 CCNFP41002 786 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 KPNA2P52292 529 aaKnown RBP13.59□□□□□ -0.23
LIMS1-201ENST00000332345 PPP1CAP62136 330 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 HSD11B2P80365 405 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 SLC7A5Q01650 507 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 FOXM1Q08050 763 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 MGAT5Q09328 741 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 GBX1Q14549 363 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 IL11RAQ14626 422 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 FASTKD3Q14CZ7 662 aaKnown RBP13.59□□□□□ -0.23
LIMS1-201ENST00000332345 KYNUQ16719 465 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 GLE1Q53GS7 698 aaKnown RBP13.59□□□□□ -0.23
LIMS1-201ENST00000332345 TMTC4Q5T4D3 741 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 BROXQ5VW32 411 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 DCUN1D3Q8IWE4 304 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 ADGRF3Q8IZF5 1079 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 RAB42Q8N4Z0 105 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 CEP112Q8N8E3 955 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 SIDT2Q8NBJ9 832 aaKnown RBP13.59□□□□□ -0.23
LIMS1-201ENST00000332345 FBXO25Q8TCJ0 367 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 RAD51AP1Q96B01 352 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 NAF1Q96HR8 494 aaKnown RBP13.59□□□□□ -0.23
LIMS1-201ENST00000332345 SLC41A2Q96JW4 573 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 WDR83Q9BRX9 315 aaKnown RBP13.59□□□□□ -0.23
LIMS1-201ENST00000332345 AARSD1Q9BTE6 412 aaKnown RBP13.59□□□□□ -0.23
LIMS1-201ENST00000332345 PHACTR1Q9C0D0 580 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 PLAC1Q9HBJ0 212 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 TAS2R13Q9NYV9 303 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 MOCS1Q9NZB8 636 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 ZFATQ9P243 1243 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 GALPQ9UBC7 116 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 POMT2Q9UKY4 750 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 SLC39A10Q9ULF5 831 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 CORO1CQ9ULV4 474 aaPredicted RBP13.59□□□□□ -0.23
LIMS1-201ENST00000332345 ICKQ9UPZ9 632 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 B3GALT1Q9Y5Z6 326 aa13.59□□□□□ -0.23
LIMS1-201ENST00000332345 PCM1Q15154 2024 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 MATN4O95460 622 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 C1orf105O95561 183 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 CBSLP0DN79 551 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 ENO3P13929 434 aaPredicted RBP13.58□□□□□ -0.24
LIMS1-201ENST00000332345 GABRB3P28472 473 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 CBSP35520 551 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 RAB28P51157 221 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 GUCY2DQ02846 1103 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 ACY1Q03154 408 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 ILF2Q12905 390 aaKnown RBP13.58□□□□□ -0.24
LIMS1-201ENST00000332345 KLHL38Q2WGJ6 581 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 ACSBG2Q5FVE4 666 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 ANKS6Q68DC2 871 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 TRMT10BQ6PF06 316 aaKnown RBP13.58□□□□□ -0.24
LIMS1-201ENST00000332345 NEK10Q6ZWH5 1172 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 BPHLQ86WA6 291 aaPredicted RBP13.58□□□□□ -0.24
LIMS1-201ENST00000332345 HNRNPLLQ8WVV9 542 aaKnown RBP13.58□□□□□ -0.24
LIMS1-201ENST00000332345 SLC22A18Q96BI1 424 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 PDE7BQ9NP56 450 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 NSMCE4AQ9NXX6 385 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 ACTR10Q9NZ32 417 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 FOXJ2Q9P0K8 574 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 TRMT6Q9UJA5 497 aaKnown RBP13.58□□□□□ -0.24
LIMS1-201ENST00000332345 USP24Q9UPU5 2620 aa13.58□□□□□ -0.24
LIMS1-201ENST00000332345 ZFHX4Q86UP3 3567 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 AHCTF1Q8WYP5 2266 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 CACNA1BQ00975 2339 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 STMND1H3BQB6 276 aa13.57□□□□□ -0.24
LIMS1-201ENST00000332345 EIF3FO00303 357 aaPredicted RBP13.57□□□□□ -0.24
LIMS1-201ENST00000332345 KLK10O43240 276 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms