RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 ZFATQ9P243 1243 aa14.4□□□□□ -0.1
CLRN1-203ENST00000328863 CORO1CQ9ULV4 474 aaPredicted RBP14.4□□□□□ -0.1
CLRN1-203ENST00000328863 ICKQ9UPZ9 632 aa14.4□□□□□ -0.1
CLRN1-203ENST00000328863 ANKRD11Q6UB99 2663 aaPredicted RBP14.4□□□□□ -0.1
CLRN1-203ENST00000328863 SDK2Q58EX2 2172 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 C9orf172C9J069 976 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 STMND1H3BQB6 276 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 ENO3P13929 434 aaPredicted RBP14.39□□□□□ -0.11
CLRN1-203ENST00000328863 POLR2CP19387 275 aaPredicted RBP14.39□□□□□ -0.11
CLRN1-203ENST00000328863 CDH3P22223 829 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 PKLRP30613 574 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 RAB28P51157 221 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 FASTKD3Q14CZ7 662 aaKnown RBP14.39□□□□□ -0.11
CLRN1-203ENST00000328863 ZNF789Q5FWF6 425 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 BROXQ5VW32 411 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 ANKS6Q68DC2 871 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 LRRC8EQ6NSJ5 796 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 UGT3A1Q6NUS8 523 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 CNSTQ6PJW8 725 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 IGDCC3Q8IVU1 814 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 SIDT2Q8NBJ9 832 aaKnown RBP14.39□□□□□ -0.11
CLRN1-203ENST00000328863 PYROXD1Q8WU10 500 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 KLHL6Q8WZ60 621 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 NAF1Q96HR8 494 aaKnown RBP14.39□□□□□ -0.11
CLRN1-203ENST00000328863 MAP3K3Q99759 626 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 AARSD1Q9BTE6 412 aaKnown RBP14.39□□□□□ -0.11
CLRN1-203ENST00000328863 DPH1Q9BZG8 443 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 SAYSD1Q9NPB0 183 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 NSMCE4AQ9NXX6 385 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 OR6C2Q9NZP2 312 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 FOXJ2Q9P0K8 574 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 SEMA5BQ9P283 1151 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 KLHL42Q9P2K6 505 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 TRMT6Q9UJA5 497 aaKnown RBP14.39□□□□□ -0.11
CLRN1-203ENST00000328863 DMXL2Q8TDJ6 3036 aa14.39□□□□□ -0.11
CLRN1-203ENST00000328863 URB1O60287 2271 aaKnown RBP14.39□□□□□ -0.11
CLRN1-203ENST00000328863 PIPSLA2A3N6 862 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 EIF3FO00303 357 aaPredicted RBP14.38□□□□□ -0.11
CLRN1-203ENST00000328863 POLR1CO15160 346 aaPredicted RBP14.38□□□□□ -0.11
CLRN1-203ENST00000328863 MAP3K7O43318 606 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 KIF1CO43896 1103 aaKnown RBP14.38□□□□□ -0.11
CLRN1-203ENST00000328863 ZBTB11O95625 1053 aaPredicted RBP14.38□□□□□ -0.11
CLRN1-203ENST00000328863 F7P08709 466 aaPredicted RBP14.38□□□□□ -0.11
CLRN1-203ENST00000328863 NELFEP18615 380 aaKnown RBP14.38□□□□□ -0.11
CLRN1-203ENST00000328863 BDKRB1P46663 353 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 CARSP49589 748 aaKnown RBP14.38□□□□□ -0.11
CLRN1-203ENST00000328863 CLCN7P51798 805 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 KPNA2P52292 529 aaKnown RBP14.38□□□□□ -0.11
CLRN1-203ENST00000328863 PLTPP55058 493 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 UCNP55089 124 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 MC2RQ01718 297 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 ACY1Q03154 408 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 FOXM1Q08050 763 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 MGAT5Q09328 741 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 ABRQ12979 859 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 CBLBQ13191 982 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 GBX1Q14549 363 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 TMTC4Q5T4D3 741 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 NEK10Q6ZWH5 1172 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 SPACA3Q8IXA5 215 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 CEP112Q8N8E3 955 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 CDKL2Q92772 493 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 RAD51AP1Q96B01 352 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 SLC41A2Q96JW4 573 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 XKR8Q9H6D3 395 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 FANCEQ9HB96 536 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 FBXO8Q9NRD0 319 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 LATS2Q9NRM7 1088 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 FAM114A2Q9NRY5 505 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 C1GALT1Q9NS00 363 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 TAS2R13Q9NYV9 303 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 ACTR10Q9NZ32 417 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 TSR3Q9UJK0 312 aaKnown RBP14.38□□□□□ -0.11
CLRN1-203ENST00000328863 SLC39A10Q9ULF5 831 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 PLAGL1Q9UM63 463 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 B3GALT1Q9Y5Z6 326 aa14.38□□□□□ -0.11
CLRN1-203ENST00000328863 CHD6Q8TD26 2715 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 IGHV5-51A0A0C4DH38 117 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.37□□□□□ -0.11
CLRN1-203ENST00000328863 BTN3A3O00478 584 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 KLK10O43240 276 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 KRT37O76014 449 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 CATP04040 527 aaKnown RBP14.37□□□□□ -0.11
CLRN1-203ENST00000328863 CHRM5P08912 532 aaPredicted RBP14.37□□□□□ -0.11
CLRN1-203ENST00000328863 CBSLP0DN79 551 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 CBSP35520 551 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 RGS4P49798 205 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 ATP1A2P50993 1020 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 HSD11B2P80365 405 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 ILF2Q12905 390 aaKnown RBP14.37□□□□□ -0.11
CLRN1-203ENST00000328863 TUBB3Q13509 450 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 ACSBG2Q5FVE4 666 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 TEDDM1Q5T9Z0 273 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 FAM45BPQ6NSW5 357 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 ZNF549Q6P9A3 640 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 TRMT10BQ6PF06 316 aaKnown RBP14.37□□□□□ -0.11
CLRN1-203ENST00000328863 SPESP1Q6UW49 350 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 CAPN12Q6ZSI9 719 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 CEP128Q6ZU80 1094 aa14.37□□□□□ -0.11
CLRN1-203ENST00000328863 SLC26A11Q86WA9 606 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms