RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 HOXC8P31273 242 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 MAP2K4P45985 399 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 RPIAP49247 311 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 RING1Q06587 406 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 VEPH1Q14D04 833 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 NKG7Q16617 165 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 POM121L1PQ3SYA9 428 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 CST9Q5W186 159 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 ANKRD26P1Q6NSI1 321 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 ZDHHC21Q8IVQ6 265 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 TMEM132CQ8N3T6 1108 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 ZBTB2Q8N680 514 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 ZNF540Q8NDQ6 660 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 EGLN2Q96KS0 407 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 PANX1Q96RD7 426 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 RBM4BQ9BQ04 359 aaKnown RBP12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 RBM4Q9BWF3 364 aaKnown RBP12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 FUNDC2Q9BWH2 189 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 NTN4Q9HB63 628 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 PSME2Q9UL46 239 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 GLYATL1P3A0A0U1RQE8 302 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 LOC100130705A0A1B0GUX0 176 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 ILVBLA1L0T0 632 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 FAM20BO75063 409 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 EOMESO95936 686 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 ANXA5P08758 320 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 COL6A1P12109 1028 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 MAGEA11P43364 429 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 CLK1P49759 484 aaKnown RBP12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 ACLYP53396 1101 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 RPS14P62263 151 aaKnown RBP12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 ARF5P84085 180 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 CBX3Q13185 183 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 ADGRF1Q5T601 910 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 OR4F3Q6IEY1 312 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 PTRH1Q86Y79 214 aaKnown RBP12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 PLD3Q8IV08 490 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 ZNF420Q8TAQ5 688 aaPredicted RBP12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 RAB2BQ8WUD1 216 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 INPP5KQ9BT40 448 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 ASPSCR1Q9BZE9 553 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 ACTL8Q9H568 366 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 SH3GLB1Q9Y371 365 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 GMPPBQ9Y5P6 360 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 TSC2P49815 1807 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 H7C4K7 107 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 CCL23P55773 120 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 FPGSQ05932 587 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 DSC1Q08554 894 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 MAD2L1Q13257 205 aaPredicted RBP12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 PON2Q15165 354 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 CYP2A13Q16696 494 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 NECAB2Q7Z6G3 386 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 ARL14EPQ8N8R7 260 aaPredicted RBP12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 NETO1Q8TDF5 533 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 MAGED4Q96JG8 741 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 RNF38Q9H0F5 515 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 SCN3BQ9NY72 215 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 VPS51Q9UID3 782 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 SAMHD1Q9Y3Z3 626 aaKnown RBP12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 CORINQ9Y5Q5 1042 aa12.62□□□□□ -0.39
HMGCS1-201ENST00000325110 PER2O15055 1255 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 SMAD6O43541 496 aaKnown RBP12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 KDM1AO60341 852 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 FSHRP23945 695 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 EIF2B2P49770 351 aaKnown RBP12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 ADARB1P78563 741 aaKnown RBP12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 TRAF3Q13114 568 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 SF1Q15637 639 aaKnown RBP12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 ELMSAN1Q6PJG2 1045 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 SBSNQ6UWP8 590 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 TSPAN33Q86UF1 283 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 SYT12Q8IV01 421 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 SPARTQ8N0X7 666 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 ZCCHC7Q8N3Z6 543 aaKnown RBP12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 SLC22A17Q8WUG5 538 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 LINC01599Q8WXQ3 324 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 AUTS2Q8WXX7 1259 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 GTF2H4Q92759 462 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 MED8Q96G25 268 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 ZIC5Q96T25 663 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 RMND5AQ9H871 391 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 C1orf109Q9NX04 203 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 ELOVL2Q9NXB9 296 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 IL17CQ9P0M4 197 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 UNCXA6NJT0 531 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 AGRPO00253 132 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 SLC28A1O00337 649 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 IFRD1O00458 451 aaPredicted RBP12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 CBFA2T3O75081 653 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 BCKDHAP12694 445 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 CDH3P22223 829 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 DCKP27707 260 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 ZXDBP98169 803 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 MBTPS1Q14703 1052 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 SUSD1Q6UWL2 747 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 UBE2R2Q712K3 238 aaPredicted RBP12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 P3H2Q8IVL5 708 aa12.61□□□□□ -0.39
HMGCS1-201ENST00000325110 GPR156Q8NFN8 814 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms