RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 RAD51AP1Q96B01 352 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 CCDC138Q96M89 665 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 FERD3LQ96RJ6 166 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 NUSAP1Q9BXS6 441 aaKnown RBP13.25□□□□□ -0.29
PRPF18-201ENST00000320054 IMP3Q9NV31 184 aaKnown RBP13.25□□□□□ -0.29
PRPF18-201ENST00000320054 OXSMQ9NWU1 459 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 ARL15Q9NXU5 204 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 CD274Q9NZQ7 290 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 OGFRQ9NZT2 677 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 SCHIP1Q9P0W5 487 aaPredicted RBP13.25□□□□□ -0.29
PRPF18-201ENST00000320054 POLG2Q9UHN1 485 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 DOLKQ9UPQ8 538 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 COLEC10Q9Y6Z7 277 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 WDFY4Q6ZS81 3184 aa13.25□□□□□ -0.29
PRPF18-201ENST00000320054 MUC6Q6W4X9 2439 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 NEMP2A6NFY4 417 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 OR52A4PA6NMU1 304 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 A8MT66 165 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 STX16-NPEPL1H3BU86 382 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 STX16O14662 325 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 KDM1AO60341 852 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 IPO13O94829 963 aaKnown RBP13.24□□□□□ -0.29
PRPF18-201ENST00000320054 ANXA5P08758 320 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 ALDH3A1P30838 453 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 BDKRB1P46663 353 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 HNMTP50135 292 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 ALDH18A1P54886 795 aaKnown RBP13.24□□□□□ -0.29
PRPF18-201ENST00000320054 DNAJB13P59910 316 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 BNIP3Q12983 259 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 SETDB1Q15047 1291 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 TCEA2Q15560 299 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 SULT1C3Q6IMI6 304 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 METTL2BQ6P1Q9 378 aaKnown RBP13.24□□□□□ -0.29
PRPF18-201ENST00000320054 OGFOD3Q6PK18 319 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 C17orf82Q86X59 251 aaPredicted RBP13.24□□□□□ -0.29
PRPF18-201ENST00000320054 NUDCD3Q8IVD9 361 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 C10orf107Q8IVU9 208 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 NAGSQ8N159 534 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 SLC25A45Q8N413 288 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 SFRP1Q8N474 314 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 FBXO39Q8N4B4 442 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 AVL9Q8NBF6 648 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 PHC3Q8NDX5 983 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 OR5AR1Q8NGP9 310 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 OR9A1PQ8NGU1 263 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 RAB3IL1Q8TBN0 382 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 ZDHHC1Q8WTX9 485 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 SREK1Q8WXA9 508 aaKnown RBP13.24□□□□□ -0.29
PRPF18-201ENST00000320054 ATL1Q8WXF7 558 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 EXT2Q93063 718 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 FBXL8Q96CD0 374 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 CXorf40BQ96DE9 158 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 PAIP2Q9BPZ3 127 aaKnown RBP13.24□□□□□ -0.29
PRPF18-201ENST00000320054 GAREM1Q9H706 876 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 MLXIPLQ9NP71 852 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 UCKL1Q9NWZ5 548 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 UTP6Q9NYH9 597 aaKnown RBP13.24□□□□□ -0.29
PRPF18-201ENST00000320054 SIRPGQ9P1W8 387 aa13.24□□□□□ -0.29
PRPF18-201ENST00000320054 ZNF624Q9P2J8 865 aaPredicted RBP13.24□□□□□ -0.29
PRPF18-201ENST00000320054 PTBP2Q9UKA9 531 aaKnown RBP13.24□□□□□ -0.29
PRPF18-201ENST00000320054 CFAP20Q9Y6A4 193 aaKnown RBP13.24□□□□□ -0.29
PRPF18-201ENST00000320054 TRIM13O60858 407 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 SDC3O75056 442 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 H2AFYO75367 372 aaKnown RBP13.23□□□□□ -0.29
PRPF18-201ENST00000320054 GFAPP14136 432 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 IMPDH1P20839 514 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 KCNA4P22459 653 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 GGT5P36269 586 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 HSD17B2P37059 387 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 MDH1P40925 334 aaKnown RBP13.23□□□□□ -0.29
PRPF18-201ENST00000320054 NBL1P41271 181 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 SLC19A1P41440 591 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 CCT8P50990 548 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 NAA20P61599 178 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 UBE2IP63279 158 aaKnown RBP13.23□□□□□ -0.29
PRPF18-201ENST00000320054 GRB7Q14451 532 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 KRT33BQ14525 404 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 ARHGAP19Q14CB8 494 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 PFKFB4Q16877 469 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 CCSMST1Q4G0I0 132 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 LIPMQ5VYY2 423 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 DUS1LQ6P1R4 473 aaKnown RBP13.23□□□□□ -0.29
PRPF18-201ENST00000320054 RAB44Q7Z6P3 723 aaPredicted RBP13.23□□□□□ -0.29
PRPF18-201ENST00000320054 TRIM42Q8IWZ5 723 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 RBM12BQ8IXT5 1001 aaKnown RBP13.23□□□□□ -0.29
PRPF18-201ENST00000320054 KLHDC8AQ8IYD2 350 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 PTGR2Q8N8N7 351 aaPredicted RBP13.23□□□□□ -0.29
PRPF18-201ENST00000320054 SAP25Q8TEE9 199 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 UBTD2Q8WUN7 234 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 RHBDF1Q96CC6 855 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 L3HYPDHQ96EM0 354 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 CAMK1GQ96NX5 476 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 PKP4Q99569 1192 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 EGFL8Q99944 293 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 C1QTNF3Q9BXJ4 246 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 KIR3DX1Q9H7L2 352 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 FSCN3Q9NQT6 498 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 POT1Q9NUX5 634 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 NCKIPSDQ9NZQ3 722 aa13.23□□□□□ -0.29
PRPF18-201ENST00000320054 SPATA7Q9P0W8 599 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms