RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ASLP04424 464 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 ENO2P09104 434 aaPredicted RBP7.39□□□□□ -1.23
IFT88-201ENST00000319980 HSD17B1P14061 328 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 ITPKAP23677 461 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 GGT5P36269 586 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 MMP12P39900 470 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 NRIP1P48552 1158 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 CTSCP53634 463 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 LIPEQ05469 1076 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 ABRQ12979 859 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 GBX1Q14549 363 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 PLEKHS1Q5SXH7 462 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 CAPRIN2Q6IMN6 1127 aaKnown RBP7.39□□□□□ -1.23
IFT88-201ENST00000319980 NEK5Q6P3R8 708 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 TECPR1Q7Z6L1 1165 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 SFTPA1Q8IWL2 248 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 CHCHD4Q8N4Q1 142 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 LILRA3Q8N6C8 439 aaPredicted RBP7.39□□□□□ -1.23
IFT88-201ENST00000319980 DDHD1Q8NEL9 900 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 FAM110BQ8TC76 370 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 TMEM125Q96AQ2 219 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 PPM1MQ96MI6 270 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 MYCBPQ99417 103 aaPredicted RBP7.39□□□□□ -1.23
IFT88-201ENST00000319980 TMUB1Q9BVT8 246 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 ZDHHC4Q9NPG8 344 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 DEC1Q9P2X7 70 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 CIDEBQ9UHD4 219 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 TRPS1Q9UHF7 1281 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 COLQQ9Y215 455 aaPredicted RBP7.39□□□□□ -1.23
IFT88-201ENST00000319980 EIF3LQ9Y262 564 aaKnown RBP7.39□□□□□ -1.23
IFT88-201ENST00000319980 COQ6Q9Y2Z9 468 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 PIKFYVEQ9Y2I7 2098 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 GFYI3L273 518 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 SLC28A1O00337 649 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 HOXC11O43248 304 aaPredicted RBP7.39□□□□□ -1.23
IFT88-201ENST00000319980 AKAP10O43572 662 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 TSPAN6O43657 245 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 TIPRLO75663 272 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 KRT6AP02538 564 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 FTH1P02794 183 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 KRT6BP04259 564 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 MTHFD1P11586 935 aaKnown RBP7.39□□□□□ -1.23
IFT88-201ENST00000319980 CYP2A7P20853 494 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 KRT6CP48668 564 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 GSK3BP49841 420 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 HNMTP50135 292 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 FOXM1Q08050 763 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 TMEM115Q12893 351 aaPredicted RBP7.39□□□□□ -1.23
IFT88-201ENST00000319980 NRF1Q16656 503 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 FNDC3BQ53EP0 1204 aaKnown RBP7.39□□□□□ -1.23
IFT88-201ENST00000319980 CDKL4Q5MAI5 379 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 FBXL19Q6PCT2 694 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 DPPA4Q7L190 304 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 TRIM46Q7Z4K8 759 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 NPAS3Q8IXF0 933 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 RAVER1Q8IY67 606 aaKnown RBP7.39□□□□□ -1.23
IFT88-201ENST00000319980 RASGEF1AQ8N9B8 481 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 CATSPER1Q8NEC5 780 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 SELENOMQ8WWX9 145 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 FGF13Q92913 245 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 FOXJ1Q92949 421 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 GLYATL1Q969I3 302 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 TMEM159Q96B96 161 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 MIEF2Q96C03 454 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 ASB16Q96NS5 453 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 BTBD9Q96Q07 612 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 KCTD14Q9BQ13 255 aaPredicted RBP7.39□□□□□ -1.23
IFT88-201ENST00000319980 EFHD1Q9BUP0 239 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 ELOVL6Q9H5J4 265 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 LRTM1Q9HBL6 345 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 ACTR3BQ9P1U1 418 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 DKK3Q9UBP4 350 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 SLC27A6Q9Y2P4 619 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 PLK4O00444 970 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 WNT9AO14904 365 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 ARPC2O15144 300 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 TPST1O60507 370 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 AP2A2O94973 939 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 PDYNP01213 254 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 MPC1LP0DKB6 136 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 NCK1P16333 377 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 VARSP26640 1264 aaKnown RBP7.38□□□□□ -1.23
IFT88-201ENST00000319980 PREPP48147 710 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 CDKL1Q00532 357 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 BNIP2Q12982 314 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 MAD2L1Q13257 205 aaPredicted RBP7.38□□□□□ -1.23
IFT88-201ENST00000319980 FAM174BQ3ZCQ3 159 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 SYTL3Q4VX76 610 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 C9orf50Q5SZB4 431 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 NAIF1Q69YI7 327 aaPredicted RBP7.38□□□□□ -1.23
IFT88-201ENST00000319980 LRRC70Q7Z2Q7 622 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 RALGPS2Q86X27 583 aaPredicted RBP7.38□□□□□ -1.23
IFT88-201ENST00000319980 TICAM1Q8IUC6 712 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 HID1Q8IV36 788 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 ETFBKMTQ8IXQ9 262 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 TCAIMQ8N3R3 496 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 LIX1Q8N485 282 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 CLHC1Q8NHS4 586 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 WFIKKN2Q8TEU8 576 aa7.38□□□□□ -1.23
IFT88-201ENST00000319980 USP7Q93009 1102 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms