RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 EPHA5P54756 1037 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 DNAJB13P59910 316 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 ERVPABLB-1P60509 514 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 RHDQ02161 417 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 CPSF6Q16630 551 aaKnown RBP eCLIP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 PYCR3Q53H96 274 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 GPRC6AQ5T6X5 926 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 ANKS6Q68DC2 871 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 SBSNQ6UWP8 590 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 ZNF554Q86TJ5 538 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 RBFAQ8N0V3 343 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 CELF5Q8N6W0 485 aaKnown RBP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 CATSPER1Q8NEC5 780 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 OR2T11Q8NH01 316 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 FNDC8Q8TC99 324 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 KLK6Q92876 244 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 PEX13Q92968 403 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 ZNF597Q96LX8 424 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 HEPHQ9BQS7 1158 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 SLC6A17Q9H1V8 727 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 TFB2MQ9H5Q4 396 aaKnown RBP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 IPPKQ9H8X2 491 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 SELENONQ9NZV5 590 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 SLAMF8Q9P0V8 285 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 CCDC85CA6NKD9 419 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 E2F3O00716 465 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 DLGAP1O14490 977 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 TOR1BO14657 336 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 PFDN6O15212 129 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 MMP20O60882 483 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 SNAP29O95721 258 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 EPHX1P07099 455 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 CAPN1P07384 714 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 TIMP2P16035 220 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 ITPKAP23677 461 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 CDK9P50750 372 aaKnown RBP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 HMGCS1Q01581 520 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 RPS6KA2Q15349 733 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 ZXDCQ2QGD7 858 aaPredicted RBP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 TMEM214Q6NUQ4 689 aaKnown RBP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 BTLAQ7Z6A9 289 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 PATL1Q86TB9 770 aaKnown RBP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 FUNDC1Q8IVP5 155 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 CLYBLQ8N0X4 340 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 NKAPQ8N5F7 415 aaKnown RBP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 BPIFB6Q8NFQ5 453 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 METTL6Q8TCB7 284 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 PHOSPHO2Q8TCD6 241 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 BPIFB1Q8TDL5 484 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 FGF14Q92915 247 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 CCDC126Q96EE4 140 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 VPS50Q96JG6 964 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 ASB16Q96NS5 453 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 MYOCQ99972 504 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 SLX1AQ9BQ83 275 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 MTIF3Q9H2K0 278 aaKnown RBP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 EPS8L2Q9H6S3 715 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 ZFP14Q9HCL3 533 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 PNPLA3Q9NST1 481 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 ARL15Q9NXU5 204 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 TBC1D14Q9P2M4 693 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 DEC1Q9P2X7 70 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 IL36AQ9UHA7 158 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 POLG2Q9UHN1 485 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 CROTQ9UKG9 612 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 RBMX2Q9Y388 322 aaKnown RBP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 DHRS7Q9Y394 339 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 PCDHGA4Q9Y5G9 962 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 CORINQ9Y5Q5 1042 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 TRPC5OSA6NMA1 111 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 NRP2O60462 931 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 SOCS5O75159 536 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 ZBTB11O95625 1053 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-202ENST00000315962 SNRPB2P08579 225 aaKnown RBP7.44□□□□□ -1.22
TRIM55-202ENST00000315962 CAPN3P20807 821 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 FSHRP23945 695 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 ALDH4A1P30038 563 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 POLR2IP36954 125 aaKnown RBP7.44□□□□□ -1.22
TRIM55-202ENST00000315962 CTSCP53634 463 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 IST1P53990 364 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 ST8SIA6P61647 398 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 LCP2Q13094 533 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 SF1Q15637 639 aaKnown RBP7.44□□□□□ -1.22
TRIM55-202ENST00000315962 CCSMST1Q4G0I0 132 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 C2orf27AQ580R0 203 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 NHSL2Q5HYW2 709 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 DOK6Q6PKX4 331 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 IL27RAQ6UWB1 636 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 PARM1Q6UWI2 310 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 PARS2Q7L3T8 475 aaKnown RBP7.44□□□□□ -1.22
TRIM55-202ENST00000315962 ERI1Q8IV48 349 aaKnown RBP7.44□□□□□ -1.22
TRIM55-202ENST00000315962 ZC3H7AQ8IWR0 971 aaKnown RBP7.44□□□□□ -1.22
TRIM55-202ENST00000315962 ZBTB2Q8N680 514 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 CLHC1Q8NHS4 586 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 OSCP1Q8WVF1 389 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 L3HYPDHQ96EM0 354 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 ADI1Q9BV57 179 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 FAM83DQ9H4H8 585 aa7.44□□□□□ -1.22
TRIM55-202ENST00000315962 CXorf21Q9HAI6 301 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms