RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ZNF490Q9ULM2 529 aaPredicted RBP12.15□□□□□ -0.46
RNF4-201ENST00000314289 PPIL1Q9Y3C6 166 aa12.15□□□□□ -0.46
RNF4-201ENST00000314289 UPK3BL1B0FP48 263 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 UPK3BL2E5RIL1 263 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 TRMUO75648 421 aaKnown RBP12.14□□□□□ -0.47
RNF4-201ENST00000314289 STK16O75716 305 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 FAM78AQ5JUQ0 283 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 LYPLAL1Q5VWZ2 237 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 GET4Q7L5D6 327 aaPredicted RBP12.14□□□□□ -0.47
RNF4-201ENST00000314289 RALGPS2Q86X27 583 aaPredicted RBP12.14□□□□□ -0.47
RNF4-201ENST00000314289 TRIML2Q8N7C3 387 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 GAB3Q8WWW8 586 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 HERVK_113Q902F9 699 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 PPWD1Q96BP3 646 aaKnown RBP12.14□□□□□ -0.47
RNF4-201ENST00000314289 HSPBAP1Q96EW2 488 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 PPM1MQ96MI6 270 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 ACTL8Q9H568 366 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 ACTR8Q9H981 624 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 SLC22A14Q9Y267 594 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 FAM149AA5PLN7 773 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 K7EPI3 171 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 K7ESM1 405 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 TIPRLO75663 272 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 MT-ND1P03886 318 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 EPB42P16452 691 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 AOAHP28039 575 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 GPM6BQ13491 265 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 DCTN2Q13561 401 aaKnown RBP12.14□□□□□ -0.47
RNF4-201ENST00000314289 CCSMST1Q4G0I0 132 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 SAMD4BQ5PRF9 694 aaKnown RBP12.14□□□□□ -0.47
RNF4-201ENST00000314289 OGFOD2Q6N063 350 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 C8orf82Q6P1X6 216 aaPredicted RBP12.14□□□□□ -0.47
RNF4-201ENST00000314289 CYP20A1Q6UW02 462 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 PARS2Q7L3T8 475 aaKnown RBP12.14□□□□□ -0.47
RNF4-201ENST00000314289 CANT1Q8WVQ1 401 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 EME1Q96AY2 570 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 SLCO4A1Q96BD0 722 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 TMIGD2Q96BF3 282 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 CCT7Q99832 543 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 ZNF696Q9H7X3 374 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 SUCOQ9UBS9 1254 aaKnown RBP12.14□□□□□ -0.47
RNF4-201ENST00000314289 A0A1W2PP18 115 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 ZSCAN9O15535 394 aaPredicted RBP12.14□□□□□ -0.47
RNF4-201ENST00000314289 TSPAN6O43657 245 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 WDR47O94967 919 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 ANXA5P08758 320 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 ELFN1P0C7U0 828 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 EPORP19235 508 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 VIPR1P32241 457 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 RCAN2Q14206 197 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 PTCHD3Q3KNS1 767 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 SULT1C3Q6IMI6 304 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 BRAT1Q6PJG6 821 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 SPATA19Q7Z5L4 167 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 DHFR2Q86XF0 187 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 KIAA2013Q8IYS2 634 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 KRTCAP2Q8N6L1 136 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 GPATCH1Q9BRR8 931 aaKnown RBP12.14□□□□□ -0.47
RNF4-201ENST00000314289 TDRKHQ9Y2W6 561 aaKnown RBP12.14□□□□□ -0.47
RNF4-201ENST00000314289 AP4S1Q9Y587 144 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 MYO15AQ9UKN7 3530 aa12.14□□□□□ -0.47
RNF4-201ENST00000314289 RFXAPO00287 272 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 VPS4BO75351 444 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 ULK1O75385 1050 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 SEC22BO75396 215 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 MATN4O95460 622 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 B3GALT4O96024 378 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 CISD3P0C7P0 127 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 MSH3P20585 1137 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 FNDC3BQ53EP0 1204 aaKnown RBP12.13□□□□□ -0.47
RNF4-201ENST00000314289 RGL4Q8IZJ4 473 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 CELF5Q8N6W0 485 aaKnown RBP12.13□□□□□ -0.47
RNF4-201ENST00000314289 CATSPER1Q8NEC5 780 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 CAAP1Q9H8G2 361 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 DOCK9Q9BZ29 2069 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 ZFC3H1O60293 1989 aaKnown RBP12.13□□□□□ -0.47
RNF4-201ENST00000314289 SGTAO43765 313 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 FGF19O95750 216 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 PFKLP17858 780 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 TPP2P29144 1249 aaPredicted RBP12.13□□□□□ -0.47
RNF4-201ENST00000314289 NR1H2P55055 460 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 MTPNP58546 118 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 ST8SIA6P61647 398 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 TSTA3Q13630 321 aaPredicted RBP12.13□□□□□ -0.47
RNF4-201ENST00000314289 IMPG1Q17R60 797 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 ZNF805Q5CZA5 627 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 DUS1LQ6P1R4 473 aaKnown RBP12.13□□□□□ -0.47
RNF4-201ENST00000314289 ADCY4Q8NFM4 1077 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 FGF13Q92913 245 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 GFM2Q969S9 779 aaKnown RBP12.13□□□□□ -0.47
RNF4-201ENST00000314289 ROPN1LQ96C74 230 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 AP2M1Q96CW1 435 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 ST14Q9Y5Y6 855 aa12.13□□□□□ -0.47
RNF4-201ENST00000314289 ZNF106Q9H2Y7 1883 aaKnown RBP12.13□□□□□ -0.47
RNF4-201ENST00000314289 PRSS51A0A1B0GVH4 220 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 ATP6V1G1O75348 118 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 HNRNPA1P09651 372 aaKnown RBP eCLIP12.12□□□□□ -0.47
RNF4-201ENST00000314289 HIST1H2AGP0C0S8 130 aaPredicted RBP12.12□□□□□ -0.47
RNF4-201ENST00000314289 IMPDH2P12268 514 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 CDH2P19022 906 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms