RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 OR56A1Q8NGH5 318 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 CCM2Q9BSQ5 444 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 SLC17A7Q9P2U7 560 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 TOR1BO14657 336 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 OR10H3O60404 316 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 CNTN5O94779 1100 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 CRATP43155 626 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 LSAMPQ13449 338 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 LIPJQ5W064 366 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 MED27Q6P2C8 311 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 C2CD4AQ8NCU7 369 aaPredicted RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 KLHL32Q96NJ5 620 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 SLC7A5P2Q9GIP4 190 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 FBRSQ9HAH7 460 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 BRF2Q9HAW0 419 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 MEPEQ9NQ76 525 aaPredicted RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 ASAH2Q9NR71 780 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 NLGN3Q9NZ94 848 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 TNFRSF11BO00300 401 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 PDPK1O15530 556 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 ATP5A1P25705 553 aaKnown RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 ITGA7Q13683 1181 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 KEAP1Q14145 624 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 XKR6Q5GH73 641 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 PLEKHS1Q5SXH7 462 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 PELOQ9BRX2 385 aaKnown RBP8.67□□□□□ -1.02
COL6A5-202ENST00000312481 LYVE1Q9Y5Y7 322 aa8.67□□□□□ -1.02
COL6A5-202ENST00000312481 GREB1LQ9C091 1923 aaPredicted RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 CXorf51AA0A1B0GTR3 108 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 TRIM43BA6NCK2 446 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 C9IYK1 514 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 CXCR6O00574 342 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 PRAF2O60831 178 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 ADORA2AP29274 412 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 LEPRP48357 1165 aaKnown RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 WDR4P57081 412 aaKnown RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 GJA9P57773 515 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 PIGGQ5H8A4 983 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 HLA-DQA1Q5Y7H0 255 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 SLC41A1Q8IVJ1 513 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 ZNF527Q8NB42 609 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 ADAM32Q8TC27 787 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 ZNF236Q9UL36 1845 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 A0A096LPI6 279 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 KCNU1A8MYU2 1149 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 FGFR3P22607 806 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 GNG2P59768 71 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 DNAJB14Q8TBM8 379 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 CRISPLD1Q9H336 500 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 ABCB10Q9NRK6 738 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 INPP5EQ9NRR6 644 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 RTTNQ86VV8 2226 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 TRAPPC13A5PLN9 417 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 HCN1O60741 890 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 RCBTB2O95199 551 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 MNDAP41218 407 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 CRISP3P54108 245 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 RASGEF1BQ0VAM2 473 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 SLC24A5Q71RS6 500 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 BRD9Q9H8M2 597 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 SCML2Q9UQR0 700 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 CASKO14936 926 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 CD9P21926 228 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 PTGR1Q14914 329 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 SEC23BQ15437 767 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 TIGD2Q4W5G0 525 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 ZNF517Q6ZMY9 492 aaPredicted RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 PRSS48Q7RTY5 328 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 FAM46DQ8NEK8 389 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 SLC7A6OSQ96CW6 309 aaPredicted RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 CORO1BQ9BR76 489 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 UCK2Q9BZX2 261 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 GPR89AB7ZAQ6 455 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 PRKD3O94806 890 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 APOC1P02654 83 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 GPR89BP0CG08 455 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 EFNA1P20827 205 aaPredicted RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 VARSP26640 1264 aaKnown RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 ASPAP45381 313 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 SLC16A1P53985 500 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 RPL38P63173 70 aaKnown RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 TIGD6Q17RP2 521 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 RALGPS2Q86X27 583 aaPredicted RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 KLHDC8BQ8IXV7 354 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 ZNF567Q8N184 647 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 GAD1Q99259 594 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 HYKKA2RU49 373 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 PLOD2O00469 737 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 PSIP1O75475 530 aaKnown RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 METTL18O95568 372 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 DHRS4L1P0CG22 281 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 POU1F1P28069 291 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 ZCCHC12Q6PEW1 402 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 C3P1Q6ZMU1 363 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 SPERTQ8NA61 448 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 FCRL2Q96LA5 508 aaPredicted RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 FN3KQ9H479 309 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 ASCC3Q8N3C0 2202 aaKnown RBP8.66□□□□□ -1.02
COL6A5-202ENST00000312481 A0A1W2PRG6 482 aa8.66□□□□□ -1.02
COL6A5-202ENST00000312481 E9PAM4 449 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms