RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 CRTC3Q6UUV7 619 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 Q6ZSR9 355 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 TBC1D3Q8IZP1 549 aaPredicted RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 SNX31Q8N9S9 440 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 TP53I13Q8NBR0 393 aaPredicted RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 FAM3CQ92520 227 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 DENND2DQ9H6A0 471 aaPredicted RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 WDR26Q9H7D7 661 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 ACTR8Q9H981 624 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 PREBQ9HCU5 417 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 DNAJC11Q9NVH1 559 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 NDE1Q9NXR1 346 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 CCDC167Q9P0B6 97 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 COLQQ9Y215 455 aaPredicted RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 SLC22A14Q9Y267 594 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 C5orf42Q9H799 3197 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 ULK1O75385 1050 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 C1orf105O95561 183 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 ASGR2P07307 311 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 SNRPB2P08579 225 aaKnown RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 ACADMP11310 421 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 EPORP19235 508 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 GPX3P22352 226 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 RGS19P49795 217 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 ADPRHP54922 357 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 RPA4Q13156 261 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 IRF4Q15306 451 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 SNCBQ16143 134 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 ATP6AP1LQ52LC2 224 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 SLC44A4Q53GD3 710 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 DOK6Q6PKX4 331 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 C16orf89Q6UX73 402 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 LRRTM4Q86VH4 590 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 PACS2Q86VP3 889 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 AMZ2Q86W34 360 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 HORMAD1Q86X24 394 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 ULK2Q8IYT8 1036 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 DEFB107AQ8IZN7 70 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 MIER2Q8N344 545 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 OR2T11Q8NH01 316 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 RPLP0P6Q8NHW5 317 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 HMGCLL1Q8TB92 370 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 PYCR2Q96C36 320 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 MAGEB10Q96LZ2 347 aaPredicted RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 SLC25A23Q9BV35 468 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 MRPL1Q9BYD6 325 aaKnown RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 SLC29A3Q9BZD2 475 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 ATG10Q9H0Y0 220 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 SDR39U1Q9NRG7 319 aaPredicted RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 PHPT1Q9NRX4 125 aaPredicted RBP16.31■□□□□ 0.2
CLCF1-201ENST00000312438 GIMAP2Q9UG22 337 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 RNF11Q9Y3C5 154 aa16.31■□□□□ 0.2
CLCF1-201ENST00000312438 A0A088AWK7 358 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 KLHL33A6NCF5 533 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 PRR23AA6NEV1 266 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 WFS1O76024 890 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 MRPL19P49406 292 aaKnown RBP16.3■□□□□ 0.2
CLCF1-201ENST00000312438 NUDT2P50583 147 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 PFN3P60673 137 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 ERVK-8P63133 956 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 ART3Q13508 389 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 ABRAXAS2Q15018 415 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 GGTA1PQ4G0N0 100 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 C6orf136Q5SQH8 315 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 AGTRAPQ6RW13 159 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 GK5Q6ZS86 529 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 KLK6Q92876 244 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 RCN3Q96D15 328 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 MRGPRX1Q96LB2 322 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 PKP4Q99569 1192 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 OSBPL6Q9BZF3 934 aa16.3■□□□□ 0.2
CLCF1-201ENST00000312438 SLC28A1O00337 649 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 KMOO15229 486 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 NARSO43776 548 aaKnown RBP16.29■□□□□ 0.2
CLCF1-201ENST00000312438 KRT6AP02538 564 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 KRT6BP04259 564 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 KRT6CP48668 564 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 HTR6P50406 440 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 CCINQ13939 588 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 NFE2L1Q14494 772 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 PAOXQ6QHF9 649 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 XKR5Q6UX68 686 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 TRIM46Q7Z4K8 759 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 MYLK4Q86YV6 388 aaPredicted RBP16.29■□□□□ 0.2
CLCF1-201ENST00000312438 KLHDC8AQ8IYD2 350 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 DSELQ8IZU8 1212 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 SFRP1Q8N474 314 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 L3MBTL4Q8NA19 623 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 ASB12Q8WXK4 309 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 STOX2Q9P2F5 926 aaPredicted RBP16.29■□□□□ 0.2
CLCF1-201ENST00000312438 KLQ9UEF7 1012 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 OR1A2Q9Y585 309 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 GPR45Q9Y5Y3 372 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 TICRRQ7Z2Z1 1910 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 REV3LO60673 3130 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 SHISA7A6NL88 538 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 RGS14O43566 566 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 CIB2O75838 187 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 SRFP11831 508 aa16.29■□□□□ 0.2
CLCF1-201ENST00000312438 ITPKAP23677 461 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms