RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 NINJ1Q92982 152 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 UNKLQ9H9P5 680 aaKnown RBP15.22■□□□□ 0.03
HCFC1-201ENST00000310441 PARP4Q9UKK3 1724 aaKnown RBP15.22■□□□□ 0.03
HCFC1-201ENST00000310441 SPAG17Q6Q759 2223 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 ARL6IP5O75915 188 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 C1RP00736 705 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 LCN1P31025 176 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 MPP1Q00013 466 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 RPL6Q02878 288 aaKnown RBP15.22■□□□□ 0.03
HCFC1-201ENST00000310441 ST3GAL4Q11206 333 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 RBM15BQ8NDT2 890 aaKnown RBP15.22■□□□□ 0.03
HCFC1-201ENST00000310441 EXOSC8Q96B26 276 aaKnown RBP15.22■□□□□ 0.03
HCFC1-201ENST00000310441 CEP295NLQ96MC4 621 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 BRD7Q9NPI1 651 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 CPSF4LA6NMK7 179 aaKnown RBP15.22■□□□□ 0.03
HCFC1-201ENST00000310441 TPTEP56180 551 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 PUM1Q14671 1186 aaKnown RBP eCLIP15.22■□□□□ 0.032e-7■■□□□ 14.5
HCFC1-201ENST00000310441 NIPAL1Q6NVV3 410 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 DNAJB9Q9UBS3 223 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 ELOA3DA6NLF2 546 aaPredicted RBP15.22■□□□□ 0.03
HCFC1-201ENST00000310441 C8BP07358 591 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 SMAD3P84022 425 aaKnown RBP15.22■□□□□ 0.03
HCFC1-201ENST00000310441 ELOA3BQ3SY89 546 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 ELOA3Q8NG57 546 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 OR52J3Q8NH60 311 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 ELMO3Q96BJ8 720 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 SLC35G5Q96KT7 338 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 ZFP3Q96NJ6 502 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 TSSK3Q96PN8 268 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 MRPL45Q9BRJ2 306 aaKnown RBP15.22■□□□□ 0.03
HCFC1-201ENST00000310441 ACAT2Q9BWD1 397 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 RHPN2P1A8MT19 583 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 CXCR6O00574 342 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 CDH12P55289 794 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 AADACL4Q5VUY2 407 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 C9orf57Q5W0N0 161 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 SPPL2BQ8TCT7 592 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 GTPBP2Q9BX10 602 aaKnown RBP15.21■□□□□ 0.03
HCFC1-201ENST00000310441 C1orf109Q9NX04 203 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 P2RX2Q9UBL9 471 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 DISC1C4P0D8 188 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 ALAS2P22557 587 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 SNTA1Q13424 505 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 LRIF1Q5T3J3 769 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 UTS2BQ765I0 119 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 ZSCAN4Q8NAM6 433 aaPredicted RBP15.21■□□□□ 0.03
HCFC1-201ENST00000310441 SPATA22Q8NHS9 363 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 ING5Q8WYH8 240 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 ACOX3O15254 700 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 COQ9O75208 318 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 GLUD1P00367 558 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 SLC7A1P30825 629 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 NDST2P52849 883 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 SEMA5AQ13591 1074 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 ADGRE1Q14246 886 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 ELAC1Q9H777 363 aaKnown RBP15.21■□□□□ 0.03
HCFC1-201ENST00000310441 IFT52Q9Y366 437 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 NUP214P35658 2090 aaPredicted RBP15.21■□□□□ 0.03
HCFC1-201ENST00000310441 SCDO00767 359 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 ESR1P03372 595 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 COL6A1P12109 1028 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 ITPKAP23677 461 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 NDUFS1P28331 727 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 DUSP9Q99956 384 aaKnown RBP15.21■□□□□ 0.03
HCFC1-201ENST00000310441 POLR2J3Q9H1A7 115 aaKnown RBP15.21■□□□□ 0.03
HCFC1-201ENST00000310441 ERVK-11Q9UQG0 969 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 CSDE1O75534 798 aaKnown RBP15.21■□□□□ 0.03
HCFC1-201ENST00000310441 PIM1P11309 404 aaPredicted RBP15.21■□□□□ 0.03
HCFC1-201ENST00000310441 HNRNPH3P31942 346 aaKnown RBP15.21■□□□□ 0.03
HCFC1-201ENST00000310441 PRPF38BQ5VTL8 546 aaKnown RBP15.21■□□□□ 0.03
HCFC1-201ENST00000310441 PRAMEF18Q5VWM3 479 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 LCN9Q8WX39 176 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 OVCA2Q8WZ82 227 aa15.21■□□□□ 0.03
HCFC1-201ENST00000310441 POLR2J2Q9GZM3 115 aaKnown RBP15.21■□□□□ 0.03
HCFC1-201ENST00000310441 ZSCAN5DPP0CG00 497 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 SMIM10L2AP0DMW4 78 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 SMIM10L2BP0DMW5 78 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 AIMP2Q13155 320 aaKnown RBP15.21■□□□□ 0.02
HCFC1-201ENST00000310441 ENPP2Q13822 863 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 IL23RQ5VWK5 629 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 ADGRD1Q6QNK2 874 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 PAQR7Q86WK9 346 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 P2RY11Q96G91 374 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 FCRL2Q96LA5 508 aaPredicted RBP15.21■□□□□ 0.02
HCFC1-201ENST00000310441 CYP11A1P05108 521 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 GRIA2P42262 883 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 POM121L1PQ3SYA9 428 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 ALKBH2Q6NS38 261 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 PROKR2Q8NFJ6 384 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 SLC25A51Q9H1U9 297 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 CDT1Q9H211 546 aa15.21■□□□□ 0.02
HCFC1-201ENST00000310441 PI15O43692 258 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 CSTF2P33240 577 aaKnown RBP eCLIP15.2■□□□□ 0.02
HCFC1-201ENST00000310441 SLC15A1P46059 708 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 CLCQ05315 142 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 RHBDF2Q6PJF5 856 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 TMEM145Q8NBT3 493 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 OR4K2Q8NGD2 314 aa15.2■□□□□ 0.02
HCFC1-201ENST00000310441 HDAC2Q92769 488 aaKnown RBP15.2■□□□□ 0.02
HCFC1-201ENST00000310441 ZNF700Q9H0M5 742 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms