RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 CATSPERZQ9NTU4 200 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 POLG2Q9UHN1 485 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 SERTAD3Q9UJW9 196 aa18.89■□□□□ 0.61
LIME1-201ENST00000309546 SNRNP200O75643 2136 aaKnown RBP18.89■□□□□ 0.61
LIME1-201ENST00000309546 SETXQ7Z333 2677 aaKnown RBP18.88■□□□□ 0.61
LIME1-201ENST00000309546 IQCF5A8MTL0 148 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 E7EQ34 232 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 RECKO95980 971 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 CCR7P32248 378 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 PPARGP37231 505 aaPredicted RBP18.88■□□□□ 0.61
LIME1-201ENST00000309546 PLOD1Q02809 727 aaPredicted RBP18.88■□□□□ 0.61
LIME1-201ENST00000309546 HSPA14Q0VDF9 509 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 CHAF1BQ13112 559 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 KCTD19Q17RG1 926 aaPredicted RBP18.88■□□□□ 0.61
LIME1-201ENST00000309546 DEFB110Q30KQ9 67 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 PTCHD3Q3KNS1 767 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 ZNF789Q5FWF6 425 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 AARS2Q5JTZ9 985 aaKnown RBP18.88■□□□□ 0.61
LIME1-201ENST00000309546 PCID2Q5JVF3 399 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 IZUMO3Q5VZ72 239 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 SYTL1Q8IYJ3 562 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 DSELQ8IZU8 1212 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 ENDOVQ8N8Q3 282 aaKnown RBP18.88■□□□□ 0.61
LIME1-201ENST00000309546 EIF2B3Q9NR50 452 aaKnown RBP18.88■□□□□ 0.61
LIME1-201ENST00000309546 PCMTD2Q9NV79 361 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 SPHK1Q9NYA1 384 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 TLK1Q9UKI8 766 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 SNX7Q9UNH6 387 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 TNRC6AQ8NDV7 1962 aaKnown RBP18.88■□□□□ 0.61
LIME1-201ENST00000309546 MYO18BQ8IUG5 2567 aa18.88■□□□□ 0.61
LIME1-201ENST00000309546 ARGFXA6NJG6 315 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 K7EM74 188 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 CEP104O60308 925 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 KDM1AO60341 852 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 TPBGLP0DKB5 382 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 ATXN8OSP0DMR3 200 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 RORAP35398 523 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 CASRP41180 1078 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 KCNJ1P48048 391 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 TERF1P54274 439 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 CPZQ66K79 652 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 DRICH1Q6PGQ1 229 aaPredicted RBP18.87■□□□□ 0.61
LIME1-201ENST00000309546 ZNF517Q6ZMY9 492 aaPredicted RBP18.87■□□□□ 0.61
LIME1-201ENST00000309546 GPR135Q8IZ08 494 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 KRT222Q8N1A0 295 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 OTUD6BQ8N6M0 293 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 CFAP61Q8NHU2 1237 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 MAIP1Q8WWC4 291 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 PEX13Q92968 403 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 OR2A14Q96R47 310 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 AP1M1Q9BXS5 423 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 TRIM55Q9BYV6 548 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 MARCH4Q9P2E8 410 aaPredicted RBP18.87■□□□□ 0.61
LIME1-201ENST00000309546 CIDEBQ9UHD4 219 aa18.87■□□□□ 0.61
LIME1-201ENST00000309546 DRG1Q9Y295 367 aaKnown RBP18.87■□□□□ 0.61
LIME1-201ENST00000309546 A0A0J9YY10 115 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 ISM1B1AKI9 464 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 CD3EAPO15446 510 aaKnown RBP18.86■□□□□ 0.61
LIME1-201ENST00000309546 ZNF749O43361 778 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 APOA4P06727 396 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 MSL3P1P0C860 447 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 CXCR5P32302 372 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 KLRB1Q12918 225 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 DNAJC21Q5F1R6 531 aaKnown RBP18.86■□□□□ 0.61
LIME1-201ENST00000309546 FAM69BQ5VUD6 431 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 PTRHD1Q6GMV3 140 aaKnown RBP18.86■□□□□ 0.61
LIME1-201ENST00000309546 TCTN3Q6NUS6 607 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 FAM198BQ6UWH4 519 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 ASB18Q6ZVZ8 466 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 VRK3Q8IV63 474 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 SLC22A15Q8IZD6 547 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 TRIM58Q8NG06 486 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 THAP4Q8WY91 577 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 FAM60AQ9NP50 221 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 IRAK4Q9NWZ3 460 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 OR6C2Q9NZP2 312 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 ZKSCAN5Q9Y2L8 839 aa18.86■□□□□ 0.61
LIME1-201ENST00000309546 PRMT5O14744 637 aaPredicted RBP18.85■□□□□ 0.61
LIME1-201ENST00000309546 OR2B3O76000 313 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 RAB40ALP0C0E4 278 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 NMBRP28336 390 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 TTPAP49638 278 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 TMED2Q15363 201 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 ZIC1Q15915 447 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 C4orf22Q6V702 233 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 ZNF662Q6ZS27 426 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 TAX1BP1Q86VP1 789 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 APLFQ8IW19 511 aaPredicted RBP18.85■□□□□ 0.61
LIME1-201ENST00000309546 LRRC8AQ8IWT6 810 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 ASZ1Q8WWH4 475 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 TCTN2Q96GX1 697 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 SGSM3Q96HU1 749 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 CARD6Q9BX69 1037 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 NLNQ9BYT8 704 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 IL22Q9GZX6 179 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 ACSS2Q9NR19 701 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 TREX1Q9NSU2 369 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 BFARQ9NZS9 450 aa18.85■□□□□ 0.61
LIME1-201ENST00000309546 TTC7AQ9ULT0 858 aaPredicted RBP18.85■□□□□ 0.61
LIME1-201ENST00000309546 CDYLQ9Y232 598 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms