RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CARFQ8N187 725 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 Q8N9G6 341 aaPredicted RBP17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 MYRIPQ8NFW9 859 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 OR5AR1Q8NGP9 310 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 CFAP61Q8NHU2 1237 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 UHMK1Q8TAS1 419 aaKnown RBP17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 MCOLN3Q8TDD5 553 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 EEF1AKMT1Q8WVE0 214 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 MRRFQ96E11 262 aaKnown RBP17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 HGH1Q9BTY7 390 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 SLC12A9Q9BXP2 914 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 SRMSQ9H3Y6 488 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 ARGLU1Q9NWB6 273 aaPredicted RBP17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 SPATA7Q9P0W8 599 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 EPHA6Q9UF33 1036 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 NOVA2Q9UNW9 492 aaKnown RBP17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 ENTPD2Q9Y5L3 495 aa17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 ARHGEF17Q96PE2 2063 aaPredicted RBP17.41■□□□□ 0.38
SSSCA1-201ENST00000309328 ZFC3H1O60293 1989 aaKnown RBP17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 D6RAR5 112 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 MYO1CO00159 1063 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 GIPC1O14908 333 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 B4GAT1O43505 415 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 TSPAN12O95859 305 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 HIST1H2AGP0C0S8 130 aaPredicted RBP17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 HIST1H2ADP20671 130 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 PPM1FP49593 454 aaPredicted RBP17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 AP1S2P56377 157 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 OR1D5P58170 312 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 TRA2AQ13595 282 aaKnown RBP eCLIP17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 UBAP2Q5T6F2 1119 aaKnown RBP17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 ARMC6Q6NXE6 501 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 DUS1LQ6P1R4 473 aaKnown RBP17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 CYHR1Q6ZMK1 362 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 TIFABQ6ZNK6 161 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 SLCO6A1Q86UG4 719 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 AMIGO1Q86WK6 493 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 RASGRP3Q8IV61 690 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 CEP97Q8IW35 865 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 OR52E1Q8NGJ3 308 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 SLC22A18Q96BI1 424 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 ZDHHC12Q96GR4 267 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 HIST1H2AHQ96KK5 128 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 TMEM74Q96NL1 305 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 DEPDC7Q96QD5 511 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 CD180Q99467 661 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 HIST1H2AJQ99878 128 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 H2AFJQ9BTM1 129 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 ZMYND15Q9H091 742 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 PARVBQ9HBI1 364 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 SNX15Q9NRS6 342 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 ACOT9Q9Y305 439 aa17.4■□□□□ 0.38
SSSCA1-201ENST00000309328 RASGRF2O14827 1237 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 TOX3O15405 576 aaPredicted RBP17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 FKBP9O95302 570 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 WISP3O95389 354 aaPredicted RBP17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 MPOP05164 745 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 COL6A2P12110 1019 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 CD1CP29017 333 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 CCL7P80098 99 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 FAM83EQ2M2I3 478 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 AMZ1Q400G9 498 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 UBE2R2Q712K3 238 aaPredicted RBP17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 PIWIL4Q7Z3Z4 852 aaKnown RBP17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 OR4D9Q8NGE8 314 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 OR9A1PQ8NGU1 263 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 HMGCLL1Q8TB92 370 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 ACMSDQ8TDX5 336 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 PKNOX2Q96KN3 472 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 UBXN10Q96LJ8 280 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 TBC1D10AQ9BXI6 508 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 NMRAL1Q9HBL8 299 aa17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 TDRKHQ9Y2W6 561 aaKnown RBP17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 CNOT1A5YKK6 2376 aaKnown RBP17.39■□□□□ 0.37
SSSCA1-201ENST00000309328 OR5K3A6NET4 321 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 PHGDHO43175 533 aaKnown RBP17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 ALDOAP04075 364 aaKnown RBP17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 SLC35E2BP0CK96 405 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 CCDC166P0CW27 439 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 PKLRP30613 574 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 MAGEA12P43365 314 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 CSRP3P50461 194 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 KPNA2P52292 529 aaKnown RBP17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 INSM1Q01101 510 aaPredicted RBP17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 PRKG2Q13237 762 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 BMPR2Q13873 1038 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 NAA30Q147X3 362 aaPredicted RBP17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 CCDC157Q569K6 752 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 CDCP2Q5VXM1 449 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 ANKS6Q68DC2 871 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 KLC3Q6P597 504 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 TMEM71Q6P5X7 295 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 DHRS13Q6UX07 377 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 ATL1Q8WXF7 558 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 CCDC138Q96M89 665 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 TSNARE1Q96NA8 513 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 TMEM109Q9BVC6 243 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 STRADBQ9C0K7 418 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 CAB39LQ9H9S4 337 aa17.38■□□□□ 0.37
SSSCA1-201ENST00000309328 PDP2Q9P2J9 529 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms