RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CSE1LP55060 971 aaKnown RBP19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 GPS1Q13098 491 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 DNASE1L3Q13609 305 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 AARS2Q5JTZ9 985 aaKnown RBP19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 LCN10Q6JVE6 187 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 FAM199XQ6PEV8 388 aaPredicted RBP19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 SPESP1Q6UW49 350 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 CDHR3Q6ZTQ4 885 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 ZNF605Q86T29 641 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 TRIM73Q86UV7 250 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 LINC01555Q8NAE3 123 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 OR8K5Q8NH50 307 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 LPGAT1Q92604 370 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 MAGOHBQ96A72 148 aaKnown RBP19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 CATSPER2Q96P56 530 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 OSBPL9Q96SU4 736 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 KLHL25Q9H0H3 589 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 PCDHB3Q9Y5E6 796 aa19.18■□□□□ 0.66
PDZRN3-202ENST00000308537 MYO18BQ8IUG5 2567 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 C2orf74A8MZ97 194 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 GOLGA8KD6RF30 607 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 GOLGA8TH3BQL2 631 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 AP3B1O00203 1094 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 SCRG1O75711 98 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 VAPBO95292 243 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 MT-ND3P03897 115 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 CAPN1P07384 714 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 CHRM5P08912 532 aaPredicted RBP19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 TCN2P20062 427 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 SHMT2P34897 504 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 POLE2P56282 527 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 HSPA14Q0VDF9 509 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 GBX1Q14549 363 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 PLEKHS1Q5SXH7 462 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 KIAA0930Q6ICG6 404 aaPredicted RBP19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 ZNF449Q6P9G9 518 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 LMNTD1Q8N9Z9 388 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 ACTRT1Q8TDG2 376 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 LRFN5Q96NI6 719 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 TTC1Q99614 292 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 CHRNA10Q9GZZ6 450 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 ADNPQ9H2P0 1102 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 SOHLH2Q9NX45 425 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 OR6C2Q9NZP2 312 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 POLG2Q9UHN1 485 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 PCSK5Q92824 1860 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 CCDC88CQ9P219 2028 aa19.17■□□□□ 0.66
PDZRN3-202ENST00000308537 PIPSLA2A3N6 862 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 ZNF185O15231 689 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 CPNE3O75131 537 aaKnown RBP19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 RECKO95980 971 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 PKLRP30613 574 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 ARL4DP49703 201 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 TERF1P54274 439 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 NFATC3Q12968 1075 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 KYNUQ16719 465 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 SYTL3Q4VX76 610 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 DNAJC21Q5F1R6 531 aaKnown RBP19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 ARMC3Q5W041 872 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 ZNF385CQ66K41 422 aaPredicted RBP19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 CCDC137Q6PK04 289 aaKnown RBP19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 TMEM135Q86UB9 458 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 MCUQ8NE86 351 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 ASZ1Q8WWH4 475 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 ARHGAP9Q9BRR9 750 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 SYTL2Q9HCH5 934 aa19.16■□□□□ 0.66
PDZRN3-202ENST00000308537 USP27XA6NNY8 438 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 C21orf140B9A014 251 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 PGRMC1O00264 195 aaKnown RBP19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 CTSBP07858 339 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 MLNP12872 115 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 NFKB2Q00653 900 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 MC1RQ01726 317 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 TMTC4Q5T4D3 741 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 C16orf46Q6P387 395 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 CENPUQ71F23 418 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 TMEM126BQ8IUX1 230 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 NAT8LQ8N9F0 302 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 PDLIM2Q96JY6 352 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 SERPINB12Q96P63 405 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 PCMTD2Q9NV79 361 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 IL1RAPL1Q9NZN1 696 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 TUBD1Q9UJT1 453 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 ANAPC5Q9UJX4 755 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 KCND3Q9UK17 655 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 SNX12Q9UMY4 172 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 TDRKHQ9Y2W6 561 aaKnown RBP19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 KCNMB2Q9Y691 235 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 ANKRD12Q6UB98 2062 aa19.15■□□□□ 0.66
PDZRN3-202ENST00000308537 FLNBO75369 2602 aaKnown RBP19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 ZCWPW2A0A1B0GU75 182 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 TMEM150CB9EJG8 249 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 PRICKLE3O43900 615 aaPredicted RBP19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 PHF2O75151 1096 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 CREG1O75629 220 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 CCNYL3P0C7X3 344 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 PPARGP37231 505 aaPredicted RBP19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 CCR10P46092 362 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 ADARP55265 1226 aaKnown RBP19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 RPS18P62269 152 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms