RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 C11orf96Q7Z7L8 435 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 ATP6V0D2Q8N8Y2 350 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 UBASH3BQ8TF42 649 aa14.3□□□□□ -0.12
PTPN9-201ENST00000306726 LOC100130705A0A1B0GUX0 176 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 ELOVL7A1L3X0 281 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 PFDN6O15212 129 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 APOL3O95236 402 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 PORP16435 677 aaPredicted RBP14.29□□□□□ -0.12
PTPN9-201ENST00000306726 S100A5P33763 92 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 LEPRP48357 1165 aaKnown RBP14.29□□□□□ -0.12
PTPN9-201ENST00000306726 GATMP50440 423 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 ST13P50502 369 aaKnown RBP14.29□□□□□ -0.12
PTPN9-201ENST00000306726 RHOAP61586 193 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 CNKSR3Q6P9H4 555 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 SCD5Q86SK9 330 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 HID1Q8IV36 788 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 SPARTQ8N0X7 666 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 PGBD5Q8N414 524 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 TTC30BQ8N4P2 665 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 DTX3Q8N9I9 347 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 SLC9A7Q96T83 725 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 RHCGQ9UBD6 479 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 OPTCQ9UBM4 332 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 PER2O15055 1255 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 TIMP1P01033 207 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 CD36P16671 472 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 SOAT1P35610 550 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 AQP6Q13520 282 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 ATP6AP1Q15904 470 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 TRAF7Q6Q0C0 670 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 RBM12BQ8IXT5 1001 aaKnown RBP14.29□□□□□ -0.12
PTPN9-201ENST00000306726 SIX5Q8N196 739 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 CSF3RQ99062 836 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 UGT2B28Q9BY64 529 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 TREX1Q9NSU2 369 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 UBA2Q9UBT2 640 aaPredicted RBP14.29□□□□□ -0.12
PTPN9-201ENST00000306726 ZFP37Q9Y6Q3 630 aaPredicted RBP14.29□□□□□ -0.12
PTPN9-201ENST00000306726 RALGAPA2Q2PPJ7 1873 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 EVPLLA8MZ36 301 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 TPST2O60704 377 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 MT-ND2P03891 347 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 SERPINB10P48595 397 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 MOGQ16653 247 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 OR4F3Q6IEY1 312 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 ZNF773Q6PK81 442 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 Q6ZNX1 250 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 RBM23Q86U06 439 aaKnown RBP14.29□□□□□ -0.12
PTPN9-201ENST00000306726 P2RY8Q86VZ1 359 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 ZDHHC21Q8IVQ6 265 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 MAL2Q969L2 176 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 GTPBP3Q969Y2 492 aaKnown RBP14.29□□□□□ -0.12
PTPN9-201ENST00000306726 MAGED4Q96JG8 741 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 NSMCE3Q96MG7 304 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 FAM118AQ9NWS6 357 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 MALT1Q9UDY8 824 aa14.29□□□□□ -0.12
PTPN9-201ENST00000306726 K7ERQ8 282 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 SLC7A4O43246 635 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 HRH2P25021 359 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 TUBA4AP68366 448 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 PPIGQ13427 754 aaKnown RBP eCLIP14.28□□□□□ -0.12
PTPN9-201ENST00000306726 SLC24A5Q71RS6 500 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 PROKR1Q8TCW9 393 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 SLC13A3Q8WWT9 602 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 MYLIPQ8WY64 445 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 LZICQ8WZA0 190 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 PANX1Q96RD7 426 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 INPP5KQ9BT40 448 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 CARS2Q9HA77 564 aaKnown RBP14.28□□□□□ -0.12
PTPN9-201ENST00000306726 ABCB9Q9NP78 766 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 IMPAD1Q9NX62 359 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 C3orf18Q9UK00 162 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 PCDHGA11Q9Y5H2 935 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 RAI2Q9Y5P3 530 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 TRIP12Q14669 1992 aaPredicted RBP14.28□□□□□ -0.12
PTPN9-201ENST00000306726 A0A0U1RQF3 1178 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 DLGAP1O14490 977 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 LDB2O43679 373 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 MTHFD2P13995 350 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 TRAF3Q13114 568 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 DGUOKQ16854 277 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 UBE2UQ5VVX9 321 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 RNF219Q5W0B1 726 aaPredicted RBP14.28□□□□□ -0.12
PTPN9-201ENST00000306726 GLB1LQ6UWU2 654 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 NETO1Q8TDF5 533 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 SLC22A17Q8WUG5 538 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 TRMOQ9BU70 441 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 GPC6Q9Y625 555 aaPredicted RBP14.28□□□□□ -0.12
PTPN9-201ENST00000306726 PMF1-BGLAPU3KQ54 211 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 A0A096LPI6 279 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.28□□□□□ -0.12
PTPN9-201ENST00000306726 GNG14A0A1W2PPG7 69 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 FGF10O15520 208 aaPredicted RBP14.28□□□□□ -0.12
PTPN9-201ENST00000306726 C21orf33P30042 268 aaPredicted RBP14.28□□□□□ -0.12
PTPN9-201ENST00000306726 HOXD12P35452 270 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 SFSWAPQ12872 951 aaKnown RBP14.28□□□□□ -0.12
PTPN9-201ENST00000306726 ZNF177Q13360 481 aaPredicted RBP14.28□□□□□ -0.12
PTPN9-201ENST00000306726 GTF2H2Q13888 395 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 GTF2H2CQ6P1K8 395 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 STX19Q8N4C7 294 aa14.28□□□□□ -0.12
PTPN9-201ENST00000306726 FUBP1Q96AE4 644 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms