RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 FAM214AQ32MH5 1076 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 ALFQ53S48 1182 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 CLEC6AQ6EIG7 209 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 ARHGAP36Q6ZRI8 547 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 UBE2Q1Q7Z7E8 422 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 CUZD1Q86UP6 607 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 FAM110BQ8TC76 370 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 MFSD3Q96ES6 412 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 HMCESQ96FZ2 354 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 FEM1CQ96JP0 617 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 ZNF641Q96N77 438 aaPredicted RBP10.7□□□□□ -0.7
LSM3-201ENST00000306024 ACAT2Q9BWD1 397 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 DCSTAMPQ9H295 470 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 ALG2Q9H553 416 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 KAT8Q9H7Z6 458 aaKnown RBP10.7□□□□□ -0.7
LSM3-201ENST00000306024 THG1LQ9NWX6 298 aaKnown RBP10.7□□□□□ -0.7
LSM3-201ENST00000306024 MTMR10Q9NXD2 777 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 ACTR3BQ9P1U1 418 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 C3orf18Q9UK00 162 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 EFCAB9A8MZ26 197 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 NEDD8-MDP1E9PL57 170 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 LOC110117498-PIK3R3F6TDL0 507 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 G3V2L1 256 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 PSMD3O43242 534 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 HOXC11O43248 304 aaPredicted RBP10.7□□□□□ -0.7
LSM3-201ENST00000306024 HSMCR30P0CW71 290 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 TGM1P22735 817 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 IL4RP24394 825 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 ATP5F1P24539 256 aaPredicted RBP10.7□□□□□ -0.7
LSM3-201ENST00000306024 OXTRP30559 389 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 SOX6P35712 828 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 GEMP55040 296 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 RHOAP61586 193 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 RAD51Q06609 339 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 ZNF460Q14592 562 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 TBRG1Q3YBR2 411 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 C6orf141Q5SZD1 244 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 GPR65Q8IYL9 337 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 OR13J1Q8NGT2 312 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 FAM162AQ96A26 154 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 ROPN1LQ96C74 230 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 BEX2Q9BXY8 128 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 PRKD2Q9BZL6 878 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 IL37Q9NZH6 218 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 LIMD1Q9UGP4 676 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.7□□□□□ -0.7
LSM3-201ENST00000306024 AAR2Q9Y312 384 aaKnown RBP10.7□□□□□ -0.7
LSM3-201ENST00000306024 PCDHB3Q9Y5E6 796 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 H3BNC9 293 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 XPNPEP2O43895 674 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 UPK1BO75841 260 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 CYP7B1O75881 506 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 FTH1P02794 183 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 MLNP12872 115 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 POLR2IP36954 125 aaKnown RBP10.7□□□□□ -0.7
LSM3-201ENST00000306024 MTHFRP42898 656 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 YBEYP58557 167 aaPredicted RBP10.7□□□□□ -0.7
LSM3-201ENST00000306024 ERVK-21P61565 698 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 ST8SIA6P61647 398 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 HIST2H2ACQ16777 129 aaPredicted RBP10.7□□□□□ -0.7
LSM3-201ENST00000306024 SPATC1Q76KD6 591 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 TP53INP2Q8IXH6 220 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 ZUFSPQ96AP4 578 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 VWCEQ96DN2 955 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 TCEAL4Q96EI5 215 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 TRMT2BQ96GJ1 504 aaKnown RBP10.7□□□□□ -0.7
LSM3-201ENST00000306024 EXOC2Q96KP1 924 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 C2orf49Q9BVC5 232 aaPredicted RBP10.7□□□□□ -0.7
LSM3-201ENST00000306024 FBRSL1Q9HCM7 1045 aaKnown RBP10.7□□□□□ -0.7
LSM3-201ENST00000306024 NSMCE4AQ9NXX6 385 aa10.7□□□□□ -0.7
LSM3-201ENST00000306024 YBX2Q9Y2T7 364 aaKnown RBP10.7□□□□□ -0.7
LSM3-201ENST00000306024 DLX3O60479 287 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 TPPPO94811 219 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 NTRK1P04629 796 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 ABCB1P08183 1280 aaPredicted RBP10.69□□□□□ -0.7
LSM3-201ENST00000306024 C7P10643 843 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 CYP4B1P13584 511 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 CXCR2P25025 360 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 HADHAP40939 763 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 ARSFP54793 590 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 CDH4P55283 916 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 SYT16Q17RD7 645 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 CYBRD1Q53TN4 286 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 OTOP3Q7RTS5 596 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 TDHQ8IZJ6 230 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 OR6Q1Q8NGQ2 317 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 IGSF8Q969P0 613 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 CNDP2Q96KP4 475 aaKnown RBP10.69□□□□□ -0.7
LSM3-201ENST00000306024 SLC22A12Q96S37 553 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 GAS2L1Q99501 681 aaPredicted RBP10.69□□□□□ -0.7
LSM3-201ENST00000306024 ZSCAN5AQ9BUG6 496 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 FICDQ9BVA6 458 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 ROGDIQ9GZN7 287 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 RC3H2Q9HBD1 1191 aaKnown RBP10.69□□□□□ -0.7
LSM3-201ENST00000306024 AGPAT4Q9NRZ5 378 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.69□□□□□ -0.7
LSM3-201ENST00000306024 RAPGEFL1Q9UHV5 662 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 AGO1Q9UL18 857 aaKnown RBP10.69□□□□□ -0.7
LSM3-201ENST00000306024 U3KQV3 271 aa10.69□□□□□ -0.7
LSM3-201ENST00000306024 NUP205Q92621 2012 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms