RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 THRSPQ92748 146 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 SRMSQ9H3Y6 488 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 CXorf21Q9HAI6 301 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 ARL8BQ9NVJ2 186 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 CD84Q9UIB8 345 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 NOP16Q9Y3C1 178 aaKnown RBP10.22□□□□□ -0.77
CLIP1-201ENST00000302528 CCDC163A0A0D9SF12 145 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 C5orf60A6NFR6 353 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 DDTLA6NHG4 134 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-201ENST00000302528 CLDN5O00501 218 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 PAGE1O75459 146 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 NFATC1O95644 943 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 HERV-K104P61576 105 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 RPL6Q02878 288 aaKnown RBP10.22□□□□□ -0.77
CLIP1-201ENST00000302528 ANKRD46Q86W74 232 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 SLC16A10Q8TF71 515 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 TNFRSF25Q93038 417 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 AZIN2Q96A70 460 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 WRAP53Q9BUR4 548 aaKnown RBP10.22□□□□□ -0.77
CLIP1-201ENST00000302528 RIOX1Q9H6W3 641 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 TLE6Q9H808 572 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 SEC61A2Q9H9S3 476 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 PCDH18Q9HCL0 1135 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 RPL36Q9Y3U8 105 aaKnown RBP10.22□□□□□ -0.77
CLIP1-201ENST00000302528 SPIN1Q9Y657 262 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-201ENST00000302528 BTBD19C9JJ37 291 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 H3BUI4 141 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 EDNRAP25101 427 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 PNLIPRP1P54315 467 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 TGFB2P61812 414 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 PHC1P78364 1004 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 SMARCB1Q12824 385 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 CHIT1Q13231 466 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 GTF2H2Q13888 395 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 UBXN11Q5T124 520 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 KIAA1161Q6NSJ0 714 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 GTF2H2CQ6P1K8 395 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 ZER1Q7Z7L7 766 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 NETO2Q8NC67 525 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 TAMM41Q96BW9 452 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 CDCA5Q96FF9 252 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 CENPNQ96H22 339 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-201ENST00000302528 GPR21Q99679 349 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 CDH22Q9UJ99 828 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 RAI2Q9Y5P3 530 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 TNFRSF10BO14763 440 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 SMIM10L2AP0DMW4 78 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 SMIM10L2BP0DMW5 78 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 CSTF2P33240 577 aaKnown RBP eCLIP10.22□□□□□ -0.77
CLIP1-201ENST00000302528 GRIK2Q13002 908 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 DUSP4Q13115 394 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 RBM48Q5RL73 367 aaKnown RBP10.22□□□□□ -0.77
CLIP1-201ENST00000302528 DNM1P34Q6PK57 102 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 COMTD1Q86VU5 262 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 MON1AQ86VX9 555 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 PHC2Q8IXK0 858 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 DNAAF1Q8NEP3 725 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 HERVK_113Q902F9 699 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 ADAD1Q96M93 576 aaKnown RBP10.22□□□□□ -0.77
CLIP1-201ENST00000302528 NECAB3Q96P71 396 aaPredicted RBP10.22□□□□□ -0.77
CLIP1-201ENST00000302528 BRF2Q9HAW0 419 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 CRTAC1Q9NQ79 661 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 GSKIPQ9P0R6 139 aa10.22□□□□□ -0.77
CLIP1-201ENST00000302528 A0A1W2PPM1 405 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 OR6C70A6NIJ9 312 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 OR6C75A6NL08 312 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 ERBB2P04626 1255 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 GPIP06744 558 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 ZNF3P17036 446 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 DRD4P21917 467 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 FUT4P22083 530 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 S100PP25815 95 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 PRPF38BQ5VTL8 546 aaKnown RBP10.21□□□□□ -0.77
CLIP1-201ENST00000302528 TMED4Q7Z7H5 227 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 C15orf40Q8WUR7 153 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 FCGR1BQ92637 280 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 CPNE2Q96FN4 548 aaPredicted RBP10.21□□□□□ -0.77
CLIP1-201ENST00000302528 P2RY11Q96G91 374 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 MND1Q9BWT6 205 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 LRRC19Q9H756 370 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 CTPS2Q9NRF8 586 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 SLC17A7Q9P2U7 560 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 A0A1W2PQ67 120 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 TISP43B9A030 160 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 EML1O00423 815 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 TOR1BO14657 336 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 EDF1O60869 148 aaKnown RBP10.21□□□□□ -0.77
CLIP1-201ENST00000302528 KCNJ13O60928 360 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 C2P06681 752 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 CYP3A4P08684 503 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 BCKDHAP12694 445 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 FOSL1P15407 271 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 OR1D2P34982 312 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 TLE2Q04725 743 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 ZDHHC21Q8IVQ6 265 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 POGLUT1Q8NBL1 392 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 ARMC5Q96C12 935 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 FAM83DQ9H4H8 585 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 SPATA7Q9P0W8 599 aa10.21□□□□□ -0.77
CLIP1-201ENST00000302528 MKLN1Q9UL63 735 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms