RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 KLK4Q9Y5K2 254 aa10.9□□□□□ -0.66
CLCC1-201ENST00000302500 A0A1W2PPV9 198 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 MATN2O00339 956 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 NIPSNAP2O75323 286 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 BANF1O75531 89 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 USP1O94782 785 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 C1QAP02745 245 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 ITGB2P05107 769 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 FURINP09958 794 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 PVRP15151 417 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 MAP4P27816 1152 aaKnown RBP10.89□□□□□ -0.67
CLCC1-201ENST00000302500 ATP5DP30049 168 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 LMAN1P49257 510 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 TUBB4BP68371 445 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 PRKG2Q13237 762 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 TUBB2AQ13885 445 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 PLCL1Q15111 1095 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 AARS2Q5JTZ9 985 aaKnown RBP10.89□□□□□ -0.67
CLCC1-201ENST00000302500 PRAMEF17Q5VTA0 474 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 LCN10Q6JVE6 187 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 HIBCHQ6NVY1 386 aaPredicted RBP10.89□□□□□ -0.67
CLCC1-201ENST00000302500 KLHL35Q6PF15 583 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 SPESP1Q6UW49 350 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 UNC5DQ6UXZ4 953 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 CDHR3Q6ZTQ4 885 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 HOOK3Q86VS8 718 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 LRRC6Q86X45 466 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 DENND6AQ8IWF6 608 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 CNTN4Q8IWV2 1026 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 PPIL6Q8IXY8 311 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 LMNTD1Q8N9Z9 388 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 HMGCLL1Q8TB92 370 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 LCN9Q8WX39 176 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 SLC39A7Q92504 469 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 LRFN5Q96NI6 719 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 FERD3LQ96RJ6 166 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 RUFY1Q96T51 708 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 NAP1L3Q99457 506 aaPredicted RBP10.89□□□□□ -0.67
CLCC1-201ENST00000302500 TUBB2BQ9BVA1 445 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 SYNPO2LQ9H987 977 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 FGF21Q9NSA1 209 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 OR6C2Q9NZP2 312 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 NFS1Q9Y697 457 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.89□□□□□ -0.67
CLCC1-201ENST00000302500 FAM169AQ9Y6X4 670 aa10.89□□□□□ -0.67
CLCC1-201ENST00000302500 MAGEB16A2A368 324 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 SLC9B1P1A6NJY1 282 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 SDR42E2A6NKP2 422 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 E7ESA3 106 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 GOLGA8MH3BSY2 632 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 RASSF9O75901 435 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 C1orf105O95561 183 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 GAS8O95995 478 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 CHRM5P08912 532 aaPredicted RBP10.88□□□□□ -0.67
CLCC1-201ENST00000302500 UGT2B7P16662 529 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 OAS2P29728 719 aaKnown RBP10.88□□□□□ -0.67
CLCC1-201ENST00000302500 SLC1A2P43004 574 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 GPS2Q13227 327 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 TUBB3Q13509 450 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 BRD3Q15059 726 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 GPR19Q15760 415 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 TBR1Q16650 682 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 DNAJC21Q5F1R6 531 aaKnown RBP10.88□□□□□ -0.67
CLCC1-201ENST00000302500 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.88□□□□□ -0.67
CLCC1-201ENST00000302500 MANEAQ5SRI9 462 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 PLEKHS1Q5SXH7 462 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 STEAP4Q687X5 459 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 NEPROQ6NW34 567 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 CYHR1Q6ZMK1 362 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 BPHLQ86WA6 291 aaPredicted RBP10.88□□□□□ -0.67
CLCC1-201ENST00000302500 PPP1R3BQ86XI6 285 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 LRRC56Q8IYG6 542 aaPredicted RBP10.88□□□□□ -0.67
CLCC1-201ENST00000302500 OR1L3Q8NH93 324 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 ASZ1Q8WWH4 475 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 RNF31Q96EP0 1072 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 PWWP2AQ96N64 755 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 ZNF285Q96NJ3 590 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 ULBP3Q9BZM4 244 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 SRMSQ9H3Y6 488 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 INTS10Q9NVR2 710 aaKnown RBP10.88□□□□□ -0.67
CLCC1-201ENST00000302500 ACTR10Q9NZ32 417 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 PLAGL1Q9UM63 463 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 RUVBL2Q9Y230 463 aaKnown RBP10.88□□□□□ -0.67
CLCC1-201ENST00000302500 ASF1AQ9Y294 204 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 PCDHB3Q9Y5E6 796 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 MRPS18BQ9Y676 258 aaKnown RBP10.88□□□□□ -0.67
CLCC1-201ENST00000302500 TEX264Q9Y6I9 313 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 FLNCQ14315 2725 aa10.88□□□□□ -0.67
CLCC1-201ENST00000302500 IFRD1O00458 451 aaPredicted RBP10.87□□□□□ -0.67
CLCC1-201ENST00000302500 PSIP1O75475 530 aaKnown RBP10.87□□□□□ -0.67
CLCC1-201ENST00000302500 KIAA0754O94854 1291 aa10.87□□□□□ -0.67
CLCC1-201ENST00000302500 RECKO95980 971 aa10.87□□□□□ -0.67
CLCC1-201ENST00000302500 ESR1P03372 595 aa10.87□□□□□ -0.67
CLCC1-201ENST00000302500 ITGAXP20702 1163 aa10.87□□□□□ -0.67
CLCC1-201ENST00000302500 SHMT2P34897 504 aa10.87□□□□□ -0.67
CLCC1-201ENST00000302500 RAB28P51157 221 aa10.87□□□□□ -0.67
CLCC1-201ENST00000302500 TERF1P54274 439 aa10.87□□□□□ -0.67
CLCC1-201ENST00000302500 DHX9Q08211 1270 aaKnown RBP10.87□□□□□ -0.67
CLCC1-201ENST00000302500 HSPA14Q0VDF9 509 aa10.87□□□□□ -0.67
CLCC1-201ENST00000302500 CRYMQ14894 314 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms