RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 TAS2R38P59533 333 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 ERVK-8P63133 956 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 ZXDAP98168 799 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 SLC25A3Q00325 362 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 PCDH1Q08174 1060 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 CAMK2BQ13554 666 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 GRB7Q14451 532 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 C2orf27AQ580R0 203 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 TMEM196Q5HYL7 178 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 ZNF648Q5T619 568 aaPredicted RBP11.72□□□□□ -0.53
TPM3-202ENST00000302206 PNCKQ6P2M8 343 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 HACD2Q6Y1H2 254 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 GALNT13Q8IUC8 556 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 PGAM4Q8N0Y7 254 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 MIER2Q8N344 545 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 HDDC3Q8N4P3 179 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 BEND7Q8N7W2 519 aaPredicted RBP11.72□□□□□ -0.53
TPM3-202ENST00000302206 ENDOVQ8N8Q3 282 aaKnown RBP11.72□□□□□ -0.53
TPM3-202ENST00000302206 CDYL2Q8N8U2 506 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 HMGCLL1Q8TB92 370 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 MSANTD3Q96H12 275 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 MARK4Q96L34 752 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 CCDC138Q96M89 665 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 FOPNLQ96NB1 174 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 MRPL1Q9BYD6 325 aaKnown RBP11.72□□□□□ -0.53
TPM3-202ENST00000302206 SDR39U1Q9NRG7 319 aaPredicted RBP11.72□□□□□ -0.53
TPM3-202ENST00000302206 AIG1Q9NVV5 245 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 BTRCQ9Y297 605 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 DNMT3AQ9Y6K1 912 aaPredicted RBP11.72□□□□□ -0.53
TPM3-202ENST00000302206 MYO15AQ9UKN7 3530 aa11.72□□□□□ -0.53
TPM3-202ENST00000302206 ATP6AP2A0A1C7CYW4 349 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 SERTM1A2A2V5 107 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 K7ESM1 405 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 AIM2O14862 343 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 CHUKO15111 745 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 UGDHO60701 494 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 PEX11AO75192 247 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 ATP6AP2O75787 350 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 CLDN9O95484 217 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 GLULP15104 373 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 MAP4P27816 1152 aaKnown RBP11.71□□□□□ -0.53
TPM3-202ENST00000302206 TIE1P35590 1138 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 WASP42768 502 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 NUDT2P50583 147 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 MRPS21P82921 87 aaKnown RBP11.71□□□□□ -0.53
TPM3-202ENST00000302206 EMX2Q04743 252 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 ZNF33BQ06732 778 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 SFSWAPQ12872 951 aaKnown RBP11.71□□□□□ -0.53
TPM3-202ENST00000302206 RPA4Q13156 261 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 ART3Q13508 389 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 PDCD4Q53EL6 469 aaKnown RBP11.71□□□□□ -0.53
TPM3-202ENST00000302206 AGKQ53H12 422 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 COQ5Q5HYK3 327 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 KIAA1161Q6NSJ0 714 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.71□□□□□ -0.53
TPM3-202ENST00000302206 TRIM46Q7Z4K8 759 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 DEFB107AQ8IZN7 70 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 DSELQ8IZU8 1212 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 HM13Q8TCT9 377 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 SKA2Q8WVK7 121 aaPredicted RBP11.71□□□□□ -0.53
TPM3-202ENST00000302206 RCN3Q96D15 328 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 PPP3R2Q96LZ3 170 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 SERPINI1Q99574 410 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 BRINP2Q9C0B6 783 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 OR2AG1Q9H205 316 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 DPEP2Q9H4A9 486 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 DCLRE1BQ9H816 532 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 RNPEPL1Q9HAU8 725 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 HEBP1Q9NRV9 189 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 DNAJC11Q9NVH1 559 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 ATXN10Q9UBB4 475 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 SLC7A8Q9UHI5 535 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 GPR45Q9Y5Y3 372 aa11.71□□□□□ -0.53
TPM3-202ENST00000302206 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.71□□□□□ -0.53
TPM3-202ENST00000302206 ANTXRLA6NF34 631 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 MGAT4DA6NG13 374 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 TMEM202A6NGA9 273 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 IGLON5A6NGN9 336 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 ARHGEF33A8MVX0 844 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 H3BM21 787 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 RGS14O43566 566 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 PLRG1O43660 514 aaKnown RBP11.7□□□□□ -0.54
TPM3-202ENST00000302206 KRT6AP02538 564 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 KRT6BP04259 564 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 EPORP19235 508 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 KRT6CP48668 564 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 MTTPP55157 894 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 ACTR3P61158 418 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 RPS21P63220 83 aaKnown RBP11.7□□□□□ -0.54
TPM3-202ENST00000302206 SIGLEC14Q08ET2 396 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 TBL3Q12788 808 aaKnown RBP11.7□□□□□ -0.54
TPM3-202ENST00000302206 MAD2L1Q13257 205 aaPredicted RBP11.7□□□□□ -0.54
TPM3-202ENST00000302206 KPNB1Q14974 876 aaKnown RBP11.7□□□□□ -0.54
TPM3-202ENST00000302206 KIF19Q2TAC6 998 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 MAP7D1Q3KQU3 841 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 ATP6AP1LQ52LC2 224 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 C6orf136Q5SQH8 315 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 IL27RAQ6UWB1 636 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 GK5Q6ZS86 529 aa11.7□□□□□ -0.54
TPM3-202ENST00000302206 Q6ZSR9 355 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms