RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 OLR1P78380 273 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 BNIP1Q12981 228 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SYPL2Q5VXT5 272 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 GALNT7Q86SF2 657 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 C12orf4Q9NQ89 552 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 MTRRQ9UBK8 725 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 COPS7AQ9UBW8 275 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PFDN2Q9UHV9 154 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SMIM30A4D0T7 59 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 C2CD4BA6NLJ0 364 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 IFI30P13284 250 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ACVR2AP27037 513 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TSPAN5P62079 268 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ALG1LQ6GMV1 187 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 NPAS4Q8IUM7 802 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TMEM203Q969S6 136 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 NODALQ96S42 347 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SLC39A3Q9BRY0 314 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 OSBPL2Q9H1P3 480 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 DNM1LO00429 736 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 VNN1O95497 513 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PSKH1P11801 424 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ACP5P13686 325 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 EIF1AXP47813 144 aaKnown RBP13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 RPS24P62847 133 aaKnown RBP13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ECT2LQ008S8 904 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TAF1AQ15573 450 aaPredicted RBP13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 GPR68Q15743 365 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ENPP7Q6UWV6 458 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 IFT80Q9P2H3 777 aaPredicted RBP13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PCDHGC3Q9UN70 934 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PCDHA2Q9Y5H9 948 aa13.34□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SIX3O95343 332 aaPredicted RBP13.33□□□□□ -0.27
CHRFAM7A-201ENST00000299847 COL6A2P12110 1019 aa13.33□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SPATC1Q76KD6 591 aa13.33□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TSPAN9O75954 239 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 S100A6P06703 90 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 HOXC12P31275 282 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DAOAP59103 153 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 RAB2AP61019 212 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SCARB2Q14108 478 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 LAPTM4BQ86VI4 370 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DNAJA3Q96EY1 480 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ACBD6Q9BR61 282 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TTTY10Q9BZA0 68 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CST11Q9H112 138 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 WRAP73Q9P2S5 460 aaPredicted RBP13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DNAJA2O60884 412 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 C8AP07357 584 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CDKL1Q00532 357 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PRKCZQ05513 592 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NOGQ13253 232 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ADGRE1Q14246 886 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ARMCX6Q7L4S7 300 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ZZZ3Q8IYH5 903 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SPERTQ8NA61 448 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NLGN2Q8NFZ4 835 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GPATCH1Q9BRR8 931 aaKnown RBP13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 COMMD4Q9H0A8 199 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 UNC93B1Q9H1C4 597 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PPM1HQ9ULR3 514 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 LOC100509620A0A075B734 347 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ZSCAN5BA6NJL1 495 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TRMUO75648 421 aaKnown RBP13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 RPP14O95059 124 aaKnown RBP13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 GBAP04062 536 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 HLA-DQB2P05538 268 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SYN1P17600 705 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PTPN2P17706 415 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TM4SF1P30408 202 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CLCN7P51798 805 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ILF3Q12906 894 aaKnown RBP eCLIP13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ATAT1Q5SQI0 421 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 BICRALQ6AI39 1079 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 C15orf52Q6ZUT6 534 aaKnown RBP13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 OR8H3Q8N146 312 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 OR2AJ1Q8NGZ0 328 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 HMGB4Q8WW32 186 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 IRGQQ8WZA9 623 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 NUS1Q96E22 293 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 SIPA1Q96FS4 1042 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 IL36AQ9UHA7 158 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 KIAA1210Q9ULL0 1709 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TMEM88BA6NKF7 163 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 LDB2O43679 373 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ALPPP05187 535 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ZNF823P16415 610 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PRR5P85299 388 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 XKR4Q5GH76 650 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ANKRD23Q86SG2 305 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 IQCKQ8N0W5 287 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 CLEC4DQ8WXI8 215 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 ADAP2Q9NPF8 381 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 DTLQ9NZJ0 730 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PDE10AQ9Y233 779 aa13.33□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PDLIM1O00151 329 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 EIF1AYO14602 144 aaKnown RBP13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 PGAM2P15259 253 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 TAS2R39P59534 338 aa13.32□□□□□ -0.28
CHRFAM7A-201ENST00000299847 RPS14P62263 151 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms