RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 NEDD8Q15843 81 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 SLC36A3Q495N2 470 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 CCDC149Q6ZUS6 474 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 DDX53Q86TM3 631 aaKnown RBP13.31□□□□□ -0.28
CDH8-201ENST00000299345 ADAMTS19Q8TE59 1207 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 GFM2Q969S9 779 aaKnown RBP13.31□□□□□ -0.28
CDH8-201ENST00000299345 BBS2Q9BXC9 721 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 SLC29A3Q9BZD2 475 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 BRD9Q9H8M2 597 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 CEPT1Q9Y6K0 416 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 NEDD8-MDP1E9PL57 170 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 LEFTY2O00292 366 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 RSL1D1O76021 490 aaKnown RBP13.31□□□□□ -0.28
CDH8-201ENST00000299345 PTPN5P54829 565 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 VAC14Q08AM6 782 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 TSTA3Q13630 321 aaPredicted RBP13.31□□□□□ -0.28
CDH8-201ENST00000299345 MPP7Q5T2T1 576 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 HTR3DQ70Z44 454 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 ANKRD46Q86W74 232 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 RNF168Q8IYW5 571 aaPredicted RBP13.31□□□□□ -0.28
CDH8-201ENST00000299345 ELMO1Q92556 727 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 ATG10Q9H0Y0 220 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 ACTL8Q9H568 366 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 LIN28AQ9H9Z2 209 aaKnown RBP13.31□□□□□ -0.28
CDH8-201ENST00000299345 DNMT3BQ9UBC3 853 aaKnown RBP13.31□□□□□ -0.28
CDH8-201ENST00000299345 ZBBXA8MT70 800 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 G3V2T6 193 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 GAPDHSO14556 408 aaPredicted RBP13.31□□□□□ -0.28
CDH8-201ENST00000299345 MTX2O75431 263 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 ASLP04424 464 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 BCKDHAP12694 445 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 ZFP36L2P47974 494 aaKnown RBP13.31□□□□□ -0.28
CDH8-201ENST00000299345 CDK9P50750 372 aaKnown RBP13.31□□□□□ -0.28
CDH8-201ENST00000299345 DAG1Q14118 895 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 SYTL3Q4VX76 610 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 CARD16Q5EG05 197 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 SPESP1Q6UW49 350 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 DPY19L3Q6ZPD9 716 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 SLC47A1Q96FL8 570 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 APOLD1Q96LR9 279 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 DCUN1D5Q9BTE7 237 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 NTMT1Q9BV86 223 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 OSBPL6Q9BZF3 934 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 SLCO3A1Q9UIG8 710 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 CASP8AP2Q9UKL3 1982 aa13.31□□□□□ -0.28
CDH8-201ENST00000299345 CXCR6O00574 342 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 BMP10O95393 424 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 THRBP10828 461 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 BMP1P13497 986 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 GGT1P19440 569 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 TCAIMQ8N3R3 496 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 CPXM2Q8N436 756 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 NRBF2Q96F24 287 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 RDH14Q9HBH5 336 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 B4GALT6Q9UBX8 382 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 TRBV5-4A0A0C4DH59 114 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 CXCL14O95715 111 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 C8GP07360 202 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 ARSFP54793 590 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 IRF8Q02556 426 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 PTCHD3Q3KNS1 767 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 SLC39A5Q6ZMH5 540 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 RFLNAQ6ZTI6 216 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 Q6ZVU0 165 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 GPR180Q86V85 440 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 GTF2H4Q92759 462 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 ITCHQ96J02 903 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 TUBA8Q9NY65 449 aaPredicted RBP13.3□□□□□ -0.28
CDH8-201ENST00000299345 INTS6Q9UL03 887 aaKnown RBP13.3□□□□□ -0.28
CDH8-201ENST00000299345 PDE10AQ9Y233 779 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 C16orf96A6NNT2 1141 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 TGM5O43548 720 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 SCELO95171 688 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 WEE1P30291 646 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 SLC5A2P31639 672 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 CCR7P32248 378 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 YAP1P46937 504 aaKnown RBP13.3□□□□□ -0.28
CDH8-201ENST00000299345 DEFB103AP81534 67 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 CREMQ03060 361 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 ZDHHC20Q5W0Z9 365 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 PHACTR4Q8IZ21 702 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 ZNF583Q96ND8 569 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 TLR9Q9NR96 1032 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 DNAJC11Q9NVH1 559 aa13.3□□□□□ -0.28
CDH8-201ENST00000299345 ACOX3O15254 700 aa13.29□□□□□ -0.28
CDH8-201ENST00000299345 CCL16O15467 120 aa13.29□□□□□ -0.28
CDH8-201ENST00000299345 PRKD3O94806 890 aa13.29□□□□□ -0.28
CDH8-201ENST00000299345 PDYNP01213 254 aa13.29□□□□□ -0.28
CDH8-201ENST00000299345 PRPS2P11908 318 aa13.29□□□□□ -0.28
CDH8-201ENST00000299345 ZBED5Q49AG3 693 aa13.29□□□□□ -0.28
CDH8-201ENST00000299345 CCNYL2Q5T2Q4 361 aa13.29□□□□□ -0.28
CDH8-201ENST00000299345 TTC23Q5W5X9 447 aa13.29□□□□□ -0.28
CDH8-201ENST00000299345 ZSWIM9Q86XI8 627 aa13.29□□□□□ -0.28
CDH8-201ENST00000299345 PAPD5Q8NDF8 572 aaKnown RBP13.29□□□□□ -0.28
CDH8-201ENST00000299345 THAP11Q96EK4 314 aa13.29□□□□□ -0.28
CDH8-201ENST00000299345 RBM38Q9H0Z9 239 aaKnown RBP13.29□□□□□ -0.28
CDH8-201ENST00000299345 CXorf21Q9HAI6 301 aa13.29□□□□□ -0.28
CDH8-201ENST00000299345 SLC22A14Q9Y267 594 aa13.29□□□□□ -0.28
CDH8-201ENST00000299345 FRMPD3Q5JV73 1810 aa13.29□□□□□ -0.28
CDH8-201ENST00000299345 ABHD14A-ACY1A0A1B0GW23 586 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms