RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 VPS4AQ9UN37 437 aa23.88■■□□□ 1.41
SPTSSA-201ENST00000298130 CHD5Q8TDI0 1954 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 RGS14O43566 566 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 TBC1D4O60343 1298 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 CSKP41240 450 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 CDKN2CP42773 168 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 SIM2Q14190 667 aaPredicted RBP23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 NR1D2Q14995 579 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 TSPAN33Q86UF1 283 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 SKA2Q8WVK7 121 aaPredicted RBP23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 EGLN2Q96KS0 407 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 TTPALQ9BTX7 342 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 VPS51Q9UID3 782 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 TMEM88BA6NKF7 163 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 FTH1P02794 183 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 ZNF7P17097 686 aaPredicted RBP23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 EFNA1P20827 205 aaPredicted RBP23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 HTR1BP28222 390 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 HMGCLP35914 325 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 GNPDA1P46926 289 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 PPP2R2BQ00005 443 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 PGS1Q32NB8 556 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 LRRC73Q5JTD7 316 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 APCDD1Q8J025 514 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 DDHD1Q8NEL9 900 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 TET1Q8NFU7 2136 aa23.87■■□□□ 1.41
SPTSSA-201ENST00000298130 FCGRTP55899 365 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 SLC14A1Q13336 389 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 CENPSQ8N2Z9 138 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 CD244Q9BZW8 370 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 ZFYVE1Q9HBF4 777 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 TMEM161AQ9NX61 479 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 ZNF510Q9Y2H8 683 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 CREG1O75629 220 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 BCKDHAP12694 445 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 DCTP40126 519 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 ILF2Q12905 390 aaKnown RBP23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 CHRNA6Q15825 494 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 TCTN1Q2MV58 587 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 RFLNAQ6ZTI6 216 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 LEMD2Q8NC56 503 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 LZICQ8WZA0 190 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 MYO19Q96H55 970 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 FEM1AQ9BSK4 669 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 CHCHD3Q9NX63 227 aaKnown RBP23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 FAM8A1Q9UBU6 413 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 TBKBP1A7MCY6 615 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 ZNF682O95780 498 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 FUCA1P04066 466 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 GALTP07902 379 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 FMO3P31513 532 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 TAF12Q16514 161 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 CES5AQ6NT32 575 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 PIH1D2Q8WWB5 315 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 GORASP2Q9H8Y8 452 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 MBD1Q9UIS9 605 aaPredicted RBP23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 CRLS1Q9UJA2 301 aa23.86■■□□□ 1.41
SPTSSA-201ENST00000298130 LOC100130705A0A1B0GUX0 176 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 A0A1W2PQ67 120 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 H7C0S8 307 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 RPLP2P05387 115 aaKnown RBP23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 OCM2P0CE71 109 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 OCMP0CE72 109 aaPredicted RBP23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 IL5RAQ01344 420 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 NFATC2Q13469 925 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 GTF2H3Q13889 308 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 GTF2IRD2BQ6EKJ0 949 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 CRTC3Q6UUV7 619 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 GTF2IRD2Q86UP8 949 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 BAG5Q9UL15 447 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 PIKFYVEQ9Y2I7 2098 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 MANBAO00462 879 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 GLUD1P00367 558 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 GRSF1Q12849 480 aaKnown RBP eCLIP23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 RUNDC3AQ59EK9 446 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 CACHD1Q5VU97 1274 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 TTC23Q5W5X9 447 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 DCDC5Q6ZRR9 648 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 ANKS3Q6ZW76 656 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 STK40Q8N2I9 435 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 FAM120BQ96EK7 910 aaKnown RBP23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 YTHDF1Q9BYJ9 559 aaKnown RBP23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 ACPTQ9BZG2 426 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 GPRC5BQ9NZH0 403 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 PSME2Q9UL46 239 aa23.85■■□□□ 1.41
SPTSSA-201ENST00000298130 BCAS1O75363 584 aaPredicted RBP23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 SH3BGRLO75368 114 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 HMGA1P17096 107 aaKnown RBP23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 PSMA3P25788 255 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 MAP2K4P45985 399 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 RGS4P49798 205 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 ZNF551Q7Z340 670 aaPredicted RBP23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 MICU2Q8IYU8 434 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 PCSK9Q8NBP7 692 aaKnown RBP23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 OARD1Q9Y530 152 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 FZD6O60353 706 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 PDYNP01213 254 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 BPIP17213 487 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 HNF1BP35680 557 aa23.84■■□□□ 1.41
SPTSSA-201ENST00000298130 TMBIM6P55061 237 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms