RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 DEC1Q9P2X7 70 aa6.53□□□□□ -1.36
TMC1-201ENST00000297784 CD207Q9UJ71 328 aa6.53□□□□□ -1.36
TMC1-201ENST00000297784 SLC25A13Q9UJS0 675 aa6.53□□□□□ -1.36
TMC1-201ENST00000297784 PPIL1Q9Y3C6 166 aa6.53□□□□□ -1.36
TMC1-201ENST00000297784 F5P12259 2224 aa6.52□□□□□ -1.36
TMC1-201ENST00000297784 CROCCQ5TZA2 2017 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 A0A0J9YYE9 177 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 H0YAE9 185 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 K7EQS6 105 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 MBTPS2O43462 519 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 TIPRLO75663 272 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 CHEK2O96017 543 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 TRBC1P01850 177 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 CTPS1P17812 591 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 TFEBP19484 476 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 TCN1P20061 433 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 HNF1BP35680 557 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 ABCG1P45844 678 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 CDKN1CP49918 316 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 SNRPD1P62314 119 aaKnown RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 INAVAQ3KP66 663 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 PPM1JQ5JR12 505 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 TMTC4Q5T4D3 741 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 C9orf64Q5T6V5 341 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 LIPMQ5VYY2 423 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 FSTL4Q6MZW2 842 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 METTL3Q86U44 580 aaKnown RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 LDB1Q86U70 411 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 DHFR2Q86XF0 187 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 PCDH20Q8N6Y1 951 aaKnown RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 ZNF557Q8N988 423 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 HDAC10Q969S8 669 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 CENPNQ96H22 339 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 ZNF486Q96H40 463 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 CSF3RQ99062 836 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 SP140LQ9H930 580 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 CACNA2D2Q9NY47 1150 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 RBMX2Q9Y388 322 aaKnown RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 NPIPB15A6NHN6 443 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 GAPDHSO14556 408 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 ACOX3O15254 700 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 GPR39O43194 453 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 BNIP3LO60238 219 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 SOCS5O75159 536 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 LEFTY1O75610 366 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 KRT75O95678 551 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 SRPRAP08240 638 aaKnown RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 FCGR1AP12314 374 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 HLA-EP13747 358 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 GSTM2P28161 218 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 SLC1A2P43004 574 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 TPTEP56180 551 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 ADARB1P78563 741 aaKnown RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 PTSQ03393 145 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 BCL2L1Q07817 233 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 ZNF234Q14588 700 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 TAF1AQ15573 450 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 LRRC73Q5JTD7 316 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 BROXQ5VW32 411 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 REP15Q6BDI9 236 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 XAF1Q6GPH4 301 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 KIAA0930Q6ICG6 404 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 ZYG11AQ6WRX3 759 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 TSPAN33Q86UF1 283 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 GALNT13Q8IUC8 556 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 CILP2Q8IUL8 1156 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 MFSD4AQ8N468 514 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 SFRP1Q8N474 314 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 DHRSXQ8N5I4 330 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 C2CD4AQ8NCU7 369 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 PIK3C3Q8NEB9 887 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 FKBP10Q96AY3 582 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 PPWD1Q96BP3 646 aaKnown RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 CDKN2AIPNLQ96HQ2 116 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 NECTIN4Q96NY8 510 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 ADGRE3Q9BY15 652 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 TRIM15Q9C019 465 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 SUV39H2Q9H5I1 410 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 ZDHHC6Q9H6R6 413 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 KCNK12Q9HB15 430 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 BPIFA1Q9NP55 256 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 NLE1Q9NVX2 485 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 IFT80Q9P2H3 777 aaPredicted RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 VWA7Q9Y334 891 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 PLXNA2O75051 1894 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 NOTOA8MTQ0 251 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 A8MX80 341 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 NEMP1O14524 444 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 POP4O95707 220 aaKnown RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 IGSF6O95976 241 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 LHCGRP22888 699 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 EEF1DP29692 281 aaKnown RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 HMGCLP35914 325 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 POLR2IP36954 125 aaKnown RBP6.52□□□□□ -1.37
TMC1-201ENST00000297784 GRIA4P48058 902 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 TIAL1Q01085 375 aaKnown RBP eCLIP6.52□□□□□ -1.37
TMC1-201ENST00000297784 IFITM3Q01628 133 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 DMPKQ09013 629 aa6.52□□□□□ -1.37
TMC1-201ENST00000297784 SQLEQ14534 574 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms