RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 UAP1Q16222 522 aaPredicted RBP11.77□□□□□ -0.53
HMGB2-201ENST00000296503 MSS51Q4VC12 460 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 HP1BP3Q5SSJ5 553 aaPredicted RBP11.77□□□□□ -0.53
HMGB2-201ENST00000296503 IRGCQ6NXR0 463 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.77□□□□□ -0.533e-6■□□□□ 10.1
HMGB2-201ENST00000296503 BBOF1Q8ND07 529 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 OR4E2Q8NGC2 313 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 GSDMBQ8TAX9 411 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 RSC1A1Q92681 617 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 ZDHHC12Q96GR4 267 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 ERP44Q9BS26 406 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 FAM129AQ9BZQ8 928 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 P2RY12Q9H244 342 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 DPH5Q9H2P9 285 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 KIR3DX1Q9H7L2 352 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 FAM114A2Q9NRY5 505 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 HRASLS2Q9NWW9 162 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 PDP2Q9P2J9 529 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 SLC24A2Q9UI40 661 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 ASF1AQ9Y294 204 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 VPS9D1Q9Y2B5 631 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 ACACAQ13085 2346 aa11.77□□□□□ -0.53
HMGB2-201ENST00000296503 TLX3O43711 291 aaPredicted RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 TTC4O95801 387 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 ITGA2BP08514 1039 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CCL4P13236 92 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CHRM3P20309 590 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 RPS3P23396 243 aaKnown RBP eCLIP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 RPL21P46778 160 aaKnown RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 GFERP55789 205 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 ARL4CP56559 192 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CALCOCO2Q13137 446 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 TMED2Q15363 201 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 HIF1AQ16665 826 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 TYSND1Q2T9J0 566 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 HSP90AA5PQ58FG0 334 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 TMEM164Q5U3C3 297 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 ZNF470Q6ECI4 717 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 ARMC6Q6NXE6 501 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 IGF2-ASQ6U949 168 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 ARHGAP22Q7Z5H3 698 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 PDZD3Q86UT5 571 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 FAM129CQ86XR2 697 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CILP2Q8IUL8 1156 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 GBP7Q8N8V2 638 aaPredicted RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 LKAAEAR1Q8TD35 194 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CALML6Q8TD86 181 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 LCN9Q8WX39 176 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 PGM2Q96G03 612 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 ZNF317Q96PQ6 595 aaPredicted RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 NAT9Q9BTE0 207 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CENPHQ9H3R5 247 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 MVB12BQ9H7P6 319 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 ASCL3Q9NQ33 180 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 C15orf41Q9Y2V0 281 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 OR6C74A6NCV1 312 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 EFCAB7A8K855 629 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 KPNA5O15131 536 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 RRP8O43159 456 aaKnown RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 S1PR4O95977 384 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 C9P02748 559 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 NUDT17P0C025 328 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 AOAHP28039 575 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 ETV5P41161 510 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 ELK3P41970 407 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 MLLT3P42568 568 aaPredicted RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CAPZBP47756 277 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 LEPRP48357 1165 aaKnown RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 SEPHS1P49903 392 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 ABRQ12979 859 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CMPK2Q5EBM0 449 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 SPANXN3Q5MJ09 141 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CACHD1Q5VU97 1274 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 LRRC69Q6ZNQ3 347 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 FAM92BQ6ZTR7 304 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CENPUQ71F23 418 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 OTOAQ7RTW8 1153 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CPLX4Q7Z7G2 160 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 KCNMB4Q86W47 210 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 IGDCC3Q8IVU1 814 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 DENND6AQ8IWF6 608 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 LMNTD2Q8IXW0 634 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 UNC5BQ8IZJ1 945 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 ACVR1CQ8NER5 493 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CFAP61Q8NHU2 1237 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 GABPB2Q8TAK5 448 aaPredicted RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 LPGAT1Q92604 370 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 USP7Q93009 1102 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CFAP36Q96G28 342 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 NAF1Q96HR8 494 aaKnown RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 C9orf72Q96LT7 481 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 PLCD4Q9BRC7 762 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 TMEM109Q9BVC6 243 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 TXLNGYQ9BZA5 131 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 CCDC68Q9H2F9 335 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 SRMSQ9H3Y6 488 aa11.76□□□□□ -0.53
HMGB2-201ENST00000296503 FBXO6Q9NRD1 293 aaPredicted RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 IARS2Q9NSE4 1012 aaKnown RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 INTS10Q9NVR2 710 aaKnown RBP11.76□□□□□ -0.53
HMGB2-201ENST00000296503 WDR70Q9NW82 654 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms