RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 TBC1D21Q8IYX1 336 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 TCTN2Q96GX1 697 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 OR2A14Q96R47 310 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 NUDT9Q9BW91 350 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 PADI2Q9Y2J8 665 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 TDRKHQ9Y2W6 561 aaKnown RBP18.96■□□□□ 0.63
CXCL3-201ENST00000296026 MAP4K5Q9Y4K4 846 aa18.96■□□□□ 0.63
CXCL3-201ENST00000296026 TCRBV7S2A1N4TA0A589 114 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 DPM1O60762 260 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 OR2B3O76000 313 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 CHRM5P08912 532 aaPredicted RBP18.95■□□□□ 0.62
CXCL3-201ENST00000296026 TPBGLP0DKB5 382 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 PSMA3P25788 255 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 FOXN2P32314 431 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 RRADP55042 308 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 ATP1A4Q13733 1029 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 ZIC1Q15915 447 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 DEFB110Q30KQ9 67 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 CCDC38Q502W7 563 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 PACS1Q6VY07 963 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 RAB43Q86YS6 212 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 SYCE1Q8N0S2 351 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 OR52K1Q8NGK4 314 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 DHRS4Q9BTZ2 278 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 SPRTNQ9H040 489 aaPredicted RBP18.95■□□□□ 0.62
CXCL3-201ENST00000296026 LRRC4CQ9HCJ2 640 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 SPHK1Q9NYA1 384 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 POLG2Q9UHN1 485 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 LRRK2Q5S007 2527 aa18.95■□□□□ 0.62
CXCL3-201ENST00000296026 PCSK5Q92824 1860 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 SLC5A10A0PJK1 596 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 CCDC162PA2VCL2 907 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 BHMG1C9JSJ3 638 aaPredicted RBP18.94■□□□□ 0.62
CXCL3-201ENST00000296026 H3BMH7 237 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 HCRTR1O43613 425 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 KLF7O75840 302 aaPredicted RBP18.94■□□□□ 0.62
CXCL3-201ENST00000296026 FTCDO95954 541 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 OR56A5P0C7T3 313 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 CBSLP0DN79 551 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 OTX2P32243 289 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 CBSP35520 551 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 GABRA4P48169 554 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 SYTL3Q4VX76 610 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 MLIPQ5VWP3 458 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 JMJD6Q6NYC1 403 aaPredicted RBP18.94■□□□□ 0.62
CXCL3-201ENST00000296026 DNAAF3Q8N9W5 541 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 GLIS1Q8NBF1 620 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 OR5K2Q8NHB8 316 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 FLVCR1-AS1Q8TAF5 88 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 SGSM3Q96HU1 749 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 MFRPQ9BY79 579 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 GPR83Q9NYM4 423 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 OR6C2Q9NZP2 312 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 LUZP4Q9P127 313 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 AP1M2Q9Y6Q5 423 aa18.94■□□□□ 0.62
CXCL3-201ENST00000296026 A0A0J9YY10 115 aa18.93■□□□□ 0.62
CXCL3-201ENST00000296026 AGFG2O95081 481 aa18.93■□□□□ 0.62
CXCL3-201ENST00000296026 ATXN8OSP0DMR3 200 aa18.93■□□□□ 0.62
CXCL3-201ENST00000296026 PLOD1Q02809 727 aaPredicted RBP18.93■□□□□ 0.62
CXCL3-201ENST00000296026 CDH17Q12864 832 aa18.93■□□□□ 0.62
CXCL3-201ENST00000296026 INPP5JQ15735 1006 aaPredicted RBP18.93■□□□□ 0.62
CXCL3-201ENST00000296026 FHL5Q5TD97 284 aa18.93■□□□□ 0.62
CXCL3-201ENST00000296026 C1orf189Q5VU69 101 aa18.93■□□□□ 0.62
CXCL3-201ENST00000296026 RHBDD2Q6NTF9 364 aa18.93■□□□□ 0.62
CXCL3-201ENST00000296026 HPS6Q86YV9 775 aa18.93■□□□□ 0.62
CXCL3-201ENST00000296026 C17orf62Q9BQA9 187 aa18.93■□□□□ 0.62
CXCL3-201ENST00000296026 CHRNA10Q9GZZ6 450 aa18.93■□□□□ 0.62
CXCL3-201ENST00000296026 SLAMF7Q9NQ25 335 aa18.93■□□□□ 0.62
CXCL3-201ENST00000296026 IMPACTQ9P2X3 320 aa18.93■□□□□ 0.62
CXCL3-201ENST00000296026 PLAGL1Q9UM63 463 aa18.93■□□□□ 0.62
CXCL3-201ENST00000296026 A0A0U1RQJ8 604 aa18.92■□□□□ 0.62
CXCL3-201ENST00000296026 ERI2A8K979 691 aaKnown RBP18.92■□□□□ 0.62
CXCL3-201ENST00000296026 ISM1B1AKI9 464 aa18.92■□□□□ 0.62
CXCL3-201ENST00000296026 OR1I1O60431 355 aa18.92■□□□□ 0.62
CXCL3-201ENST00000296026 GAS8O95995 478 aa18.92■□□□□ 0.62
CXCL3-201ENST00000296026 CSE1LP55060 971 aaKnown RBP18.92■□□□□ 0.62
CXCL3-201ENST00000296026 KIF5AQ12840 1032 aa18.92■□□□□ 0.62
CXCL3-201ENST00000296026 RAPSNQ13702 412 aa18.92■□□□□ 0.62
CXCL3-201ENST00000296026 PRR30Q53SZ7 412 aaPredicted RBP18.92■□□□□ 0.62
CXCL3-201ENST00000296026 LYPLAL1Q5VWZ2 237 aa18.92■□□□□ 0.62
CXCL3-201ENST00000296026 MRGPREQ86SM8 312 aa18.92■□□□□ 0.62
CXCL3-201ENST00000296026 RBMXL3Q8N7X1 1067 aaKnown RBP18.92■□□□□ 0.62
CXCL3-201ENST00000296026 Q8NA96 180 aa18.92■□□□□ 0.62
CXCL3-201ENST00000296026 OR13J1Q8NGT2 312 aa18.92■□□□□ 0.62
CXCL3-201ENST00000296026 ATG4AQ8WYN0 398 aa18.92■□□□□ 0.62
CXCL3-201ENST00000296026 HDAC10Q969S8 669 aa18.92■□□□□ 0.62
CXCL3-201ENST00000296026 GBP5Q96PP8 586 aa18.92■□□□□ 0.62
CXCL3-201ENST00000296026 TTC1Q99614 292 aa18.92■□□□□ 0.62
CXCL3-201ENST00000296026 SMAD5Q99717 465 aaKnown RBP18.92■□□□□ 0.62
CXCL3-201ENST00000296026 BAG1Q99933 345 aaPredicted RBP18.92■□□□□ 0.62
CXCL3-201ENST00000296026 DHCR7Q9UBM7 475 aaKnown RBP18.92■□□□□ 0.62
CXCL3-201ENST00000296026 GPN3Q9UHW5 284 aaPredicted RBP18.92■□□□□ 0.62
CXCL3-201ENST00000296026 HEATR9A2RTY3 570 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 ZSCAN9O15535 394 aaPredicted RBP18.91■□□□□ 0.62
CXCL3-201ENST00000296026 KDM1AO60341 852 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 GOT2P00505 430 aaKnown RBP18.91■□□□□ 0.62
CXCL3-201ENST00000296026 CTSBP07858 339 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 DCDP81605 110 aaKnown RBP18.91■□□□□ 0.62
CXCL3-201ENST00000296026 SSPNQ14714 243 aa18.91■□□□□ 0.62
CXCL3-201ENST00000296026 KYNUQ16719 465 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms