RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 FBXO27Q8NI29 283 aa22.28■■□□□ 1.16
PTX3-201ENST00000295927 ASB12Q8WXK4 309 aa22.28■■□□□ 1.16
PTX3-201ENST00000295927 PYCR2Q96C36 320 aa22.28■■□□□ 1.16
PTX3-201ENST00000295927 MYOCQ99972 504 aa22.28■■□□□ 1.16
PTX3-201ENST00000295927 NTMT1Q9BV86 223 aa22.28■■□□□ 1.16
PTX3-201ENST00000295927 ATG10Q9H0Y0 220 aa22.28■■□□□ 1.16
PTX3-201ENST00000295927 DPEP2Q9H4A9 486 aa22.28■■□□□ 1.16
PTX3-201ENST00000295927 TM7SF3Q9NS93 570 aa22.28■■□□□ 1.16
PTX3-201ENST00000295927 GIMAP2Q9UG22 337 aa22.28■■□□□ 1.16
PTX3-201ENST00000295927 POLG2Q9UHN1 485 aa22.28■■□□□ 1.16
PTX3-201ENST00000295927 LOC100653049A0A140TA62 436 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 GPR89AB7ZAQ6 455 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 GYG2O15488 501 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 KRT34O76011 436 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 C1orf105O95561 183 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 GPR89BP0CG08 455 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 HGFP14210 728 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 CD1EP15812 388 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 PRDX6P30041 224 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 TMEM31Q5JXX7 168 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 SCIMPQ6UWF3 145 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 UTP4Q969X6 686 aaKnown RBP22.27■■□□□ 1.16
PTX3-201ENST00000295927 TUBGCP3Q96CW5 907 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 CCDC138Q96M89 665 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 SLC40A1Q9NP59 571 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.27■■□□□ 1.16
PTX3-201ENST00000295927 ZNHIT2Q9UHR6 403 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 DNMT3AQ9Y6K1 912 aaPredicted RBP22.27■■□□□ 1.16
PTX3-201ENST00000295927 COX4I1P13073 169 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 XKR7Q5GH72 579 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 ZNF687Q8N1G0 1237 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 OXR1Q8N573 874 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 SNX31Q8N9S9 440 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 PKP4Q99569 1192 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 APOOQ9BUR5 198 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 CIDEBQ9UHD4 219 aa22.27■■□□□ 1.16
PTX3-201ENST00000295927 KMOO15229 486 aa22.26■■□□□ 1.15
PTX3-201ENST00000295927 VPS4BO75351 444 aa22.26■■□□□ 1.15
PTX3-201ENST00000295927 EBLN1P0CF75 366 aa22.26■■□□□ 1.15
PTX3-201ENST00000295927 ACADLP28330 430 aa22.26■■□□□ 1.15
PTX3-201ENST00000295927 GRB7Q14451 532 aa22.26■■□□□ 1.15
PTX3-201ENST00000295927 DEFB123Q8N688 67 aa22.26■■□□□ 1.15
PTX3-201ENST00000295927 FBXO15Q8NCQ5 510 aaPredicted RBP22.26■■□□□ 1.15
PTX3-201ENST00000295927 RBM15BQ8NDT2 890 aaKnown RBP22.26■■□□□ 1.15
PTX3-201ENST00000295927 RAB3IPQ96QF0 476 aaPredicted RBP22.26■■□□□ 1.15
PTX3-201ENST00000295927 CADM1Q9BY67 442 aaKnown RBP22.26■■□□□ 1.15
PTX3-201ENST00000295927 BTBD1Q9H0C5 482 aa22.26■■□□□ 1.15
PTX3-201ENST00000295927 OR52A5Q9H2C5 316 aa22.26■■□□□ 1.15
PTX3-201ENST00000295927 POLMQ9NP87 494 aaPredicted RBP22.26■■□□□ 1.15
PTX3-201ENST00000295927 PFDN4Q9NQP4 134 aa22.26■■□□□ 1.15
PTX3-201ENST00000295927 ITM2CQ9NQX7 267 aa22.26■■□□□ 1.15
PTX3-201ENST00000295927 STOX2Q9P2F5 926 aaPredicted RBP22.26■■□□□ 1.15
PTX3-201ENST00000295927 EBF1Q9UH73 591 aa22.26■■□□□ 1.15
PTX3-201ENST00000295927 SLC22A14Q9Y267 594 aa22.26■■□□□ 1.15
PTX3-201ENST00000295927 RNF11Q9Y3C5 154 aa22.26■■□□□ 1.15
PTX3-201ENST00000295927 FUCA1P04066 466 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 ALDOCP09972 364 aaKnown RBP22.25■■□□□ 1.15
PTX3-201ENST00000295927 ITPKAP23677 461 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 HMOX2P30519 316 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 HTR6P50406 440 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 MNAT1P51948 309 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 PFN3P60673 137 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 RPA4Q13156 261 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 PUS10Q3MIT2 529 aaKnown RBP22.25■■□□□ 1.15
PTX3-201ENST00000295927 LONP2Q86WA8 852 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 OR2T34Q8NGX1 318 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 ATL1Q8WXF7 558 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 CCT7Q99832 543 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 DNAJC11Q9NVH1 559 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 TRPS1Q9UHF7 1281 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 LBPP18428 481 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 PRKCQQ04759 706 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 SQLEQ14534 574 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 AGTRAPQ6RW13 159 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 TRIM69Q86WT6 500 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 PGBD3Q8N328 593 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 CHCHD4Q8N4Q1 142 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 SPDYE1Q8NFV5 336 aaPredicted RBP22.25■■□□□ 1.15
PTX3-201ENST00000295927 OR2T11Q8NH01 316 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 ZDHHC5Q9C0B5 715 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 LMAN1LQ9HAT1 526 aa22.25■■□□□ 1.15
PTX3-201ENST00000295927 LRRC72A6NJI9 287 aa22.24■■□□□ 1.15
PTX3-201ENST00000295927 MEI4A8MW99 385 aa22.24■■□□□ 1.15
PTX3-201ENST00000295927 GSC2O15499 205 aa22.24■■□□□ 1.15
PTX3-201ENST00000295927 SLC16A8O95907 504 aa22.24■■□□□ 1.15
PTX3-201ENST00000295927 CEACAM5P06731 702 aa22.24■■□□□ 1.15
PTX3-201ENST00000295927 PRR35P0CG20 571 aa22.24■■□□□ 1.15
PTX3-201ENST00000295927 THRAP10827 490 aa22.24■■□□□ 1.15
PTX3-201ENST00000295927 DGKEP52429 567 aa22.24■■□□□ 1.15
PTX3-201ENST00000295927 MXRA7P84157 204 aa22.24■■□□□ 1.15
PTX3-201ENST00000295927 IL27RAQ6UWB1 636 aa22.24■■□□□ 1.15
PTX3-201ENST00000295927 PDZD3Q86UT5 571 aa22.24■■□□□ 1.15
PTX3-201ENST00000295927 MRGBPQ9NV56 204 aa22.24■■□□□ 1.15
PTX3-201ENST00000295927 USP36Q9P275 1121 aaKnown RBP22.24■■□□□ 1.15
PTX3-201ENST00000295927 SLC17A4Q9Y2C5 497 aa22.24■■□□□ 1.15
PTX3-201ENST00000295927 CHURC1-FNTBB4DL54 471 aa22.23■■□□□ 1.15
PTX3-201ENST00000295927 CLDN9O95484 217 aa22.23■■□□□ 1.15
PTX3-201ENST00000295927 IMPA1P29218 277 aa22.23■■□□□ 1.15
PTX3-201ENST00000295927 ELF3P78545 371 aaPredicted RBP22.23■■□□□ 1.15
PTX3-201ENST00000295927 METRNLQ641Q3 311 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms