RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 A0A1W2PP18 115 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 GRXCR2A6NFK2 248 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 RGS14O43566 566 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 GSTM1P09488 218 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 CAPN3P20807 821 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 C5AR1P21730 350 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 RGS19P49795 217 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 GSTM4Q03013 218 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 EMX2Q04743 252 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 CNTN1Q12860 1018 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 TMEM196Q5HYL7 178 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 MMAAQ8IVH4 418 aaKnown RBP8.94□□□□□ -0.98
PDPN-201ENST00000294489 DNASE1L2Q92874 299 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 NUS1Q96E22 293 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 COX14Q96I36 57 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 LINC00615Q96LM1 132 aaPredicted RBP8.94□□□□□ -0.98
PDPN-201ENST00000294489 C6orf203Q9P0P8 240 aaPredicted RBP8.94□□□□□ -0.98
PDPN-201ENST00000294489 TMEM181Q9P2C4 612 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 TRPS1Q9UHF7 1281 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 LRCH1Q9Y2L9 728 aa8.94□□□□□ -0.98
PDPN-201ENST00000294489 DYTNA2CJ06 578 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 CCDC154A6NI56 674 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 SLC28A1O00337 649 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 ACOT8O14734 319 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 TSPAN6O43657 245 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 ULK1O75385 1050 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 RECQL5O94762 991 aaPredicted RBP8.93□□□□□ -0.98
PDPN-201ENST00000294489 WDR47O94967 919 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 SOX9P48436 509 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 HTR6P50406 440 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 SLC7A2P52569 658 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 AP1S2P56377 157 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 MRPS22P82650 360 aaKnown RBP8.93□□□□□ -0.98
PDPN-201ENST00000294489 TRAP1Q12931 704 aaKnown RBP8.93□□□□□ -0.98
PDPN-201ENST00000294489 RCAN2Q14206 197 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 ABRAXAS2Q15018 415 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 C8orf82Q6P1X6 216 aaPredicted RBP8.93□□□□□ -0.98
PDPN-201ENST00000294489 ADAMTSL4Q6UY14 1074 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 RETREG3Q86VR2 466 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 SPATA24Q86W54 205 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 RALGPS2Q86X27 583 aaPredicted RBP8.93□□□□□ -0.98
PDPN-201ENST00000294489 SFRP1Q8N474 314 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 FAM156AQ8NDB6 213 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 WRAP53Q9BUR4 548 aaKnown RBP8.93□□□□□ -0.98
PDPN-201ENST00000294489 ACTR8Q9H981 624 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 DYRK4Q9NR20 520 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 LAMA3Q16787 3333 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 SLC5A10A0PJK1 596 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 PRORSD1PA6NEY8 169 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 OR2AG2A6NM03 316 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 CTHP32929 405 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 POLR2JP52435 117 aaKnown RBP8.93□□□□□ -0.98
PDPN-201ENST00000294489 RPS14P62263 151 aaKnown RBP8.93□□□□□ -0.98
PDPN-201ENST00000294489 PRKG2Q13237 762 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 MAD2L1Q13257 205 aaPredicted RBP8.93□□□□□ -0.98
PDPN-201ENST00000294489 CST6Q15828 149 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 AP5B1Q2VPB7 878 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 SYTL3Q4VX76 610 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 IZUMO2Q6UXV1 221 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 MBOAT1Q6ZNC8 495 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 LRRC70Q7Z2Q7 622 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 MINDY1Q8N5J2 469 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 ZNF513Q8N8E2 541 aaPredicted RBP8.93□□□□□ -0.98
PDPN-201ENST00000294489 CSGALNACT1Q8TDX6 532 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 C8orf33Q9H7E9 229 aaPredicted RBP8.93□□□□□ -0.98
PDPN-201ENST00000294489 IL1RL2Q9HB29 575 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 HEBP1Q9NRV9 189 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 MAP10Q9P2G4 905 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 KLQ9UEF7 1012 aa8.93□□□□□ -0.98
PDPN-201ENST00000294489 FAM234BA2RU67 622 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 SHISA7A6NL88 538 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 LOC730098B7Z3J9 87 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 C9JVG2 144 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 H3BNX3 289 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 PLK4O00444 970 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 LSM1O15116 133 aaKnown RBP8.92□□□□□ -0.98
PDPN-201ENST00000294489 ATG13O75143 517 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 CLDN9O95484 217 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 KRT6AP02538 564 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 KRT6BP04259 564 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 GLULP15104 373 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 MAP4P27816 1152 aaKnown RBP8.92□□□□□ -0.98
PDPN-201ENST00000294489 KRT6CP48668 564 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 ATXN3P54252 364 aaPredicted RBP8.92□□□□□ -0.98
PDPN-201ENST00000294489 UFM1P61960 85 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 FOXM1Q08050 763 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 TMEM115Q12893 351 aaPredicted RBP8.92□□□□□ -0.98
PDPN-201ENST00000294489 TRIP10Q15642 601 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 IMPG1Q17R60 797 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 AAK1Q2M2I8 961 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 CHRDL2Q6WN34 429 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 VRK3Q8IV63 474 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 PQLC1Q8N2U9 271 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 N4BP2L2Q92802 583 aaPredicted RBP8.92□□□□□ -0.98
PDPN-201ENST00000294489 GLMNQ92990 594 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 TMEM159Q96B96 161 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 LRGUKQ96M69 825 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 HBEGFQ99075 208 aa8.92□□□□□ -0.98
PDPN-201ENST00000294489 GPATCH1Q9BRR8 931 aaKnown RBP8.92□□□□□ -0.98
PDPN-201ENST00000294489 SLC39A3Q9BRY0 314 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms