RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 NCK1P16333 377 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 CRISP3P54108 245 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 FBXO48Q5FWF7 155 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 ZNF554Q86TJ5 538 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 LAPTM4BQ86VI4 370 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 PQLC3Q8N755 202 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 RIT1Q92963 219 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 RPL10LQ96L21 214 aaKnown RBP12.55□□□□□ -0.4
PTCD1-201ENST00000292478 GMLQ99445 158 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 CCM2Q9BSQ5 444 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 PHF11Q9UIL8 331 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 ARFGEF2Q9Y6D5 1785 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 HAS3O00219 553 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 AGR2O95994 175 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 AHSGP02765 367 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 HAPLN1P10915 354 aaPredicted RBP12.55□□□□□ -0.4
PTCD1-201ENST00000292478 VARSP26640 1264 aaKnown RBP12.55□□□□□ -0.4
PTCD1-201ENST00000292478 BLKP51451 505 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 CCR8P51685 355 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 RAB15P59190 212 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 SP140Q13342 867 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 CWF19L1Q69YN2 538 aaKnown RBP12.55□□□□□ -0.4
PTCD1-201ENST00000292478 AHSA2Q719I0 299 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 NUDT13Q86X67 352 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 CAPSLQ8WWF8 208 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 COQ7Q99807 217 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 SMOQ99835 787 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 STX16-NPEPL1H3BU86 382 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 STX16O14662 325 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 DAG1Q14118 895 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 TAF8Q7Z7C8 310 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 AKAP14Q86UN6 197 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 ANKRD46Q86W74 232 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 PIK3R3Q92569 461 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 PEX13Q92968 403 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 TSGA13Q96PP4 275 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 EBF3Q9H4W6 596 aa12.55□□□□□ -0.4
PTCD1-201ENST00000292478 KAT8Q9H7Z6 458 aaKnown RBP12.55□□□□□ -0.4
PTCD1-201ENST00000292478 MRPS30Q9NP92 439 aaKnown RBP12.55□□□□□ -0.4
PTCD1-201ENST00000292478 ZNF142P52746 1687 aaPredicted RBP12.55□□□□□ -0.4
PTCD1-201ENST00000292478 LRP6O75581 1613 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 AIREO43918 545 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 HSPB3Q12988 150 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 HFE2Q6ZVN8 426 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 TRPV1Q8NER1 839 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 C9orf43Q8TAL5 461 aaPredicted RBP12.54□□□□□ -0.4
PTCD1-201ENST00000292478 METTL21AQ8WXB1 218 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 SRMSQ9H3Y6 488 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 GPN1Q9HCN4 374 aaPredicted RBP12.54□□□□□ -0.4
PTCD1-201ENST00000292478 FBXW2Q9UKT8 454 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 WASF2Q9Y6W5 498 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 A0A1W2PRB8 838 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 LCHNA4D1U4 455 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 TEX28O15482 410 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 NIPSNAP2O75323 286 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 UBXN7O94888 489 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 S100GP29377 79 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 JAG1P78504 1218 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 MERTKQ12866 999 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.54□□□□□ -0.4
PTCD1-201ENST00000292478 LINC00471Q8N535 108 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 RBM18Q96H35 190 aaKnown RBP12.54□□□□□ -0.4
PTCD1-201ENST00000292478 SIGLEC10Q96LC7 697 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 CDADC1Q9BWV3 514 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 OR2AG1Q9H205 316 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 POLMQ9NP87 494 aaPredicted RBP12.54□□□□□ -0.4
PTCD1-201ENST00000292478 ZNF222Q9UK12 451 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 FAM92AA1XBS5 289 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 ANKRD66B4E2M5 251 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 PRAMEF11O60813 436 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 TBX18O95935 607 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 CLCN4P51793 760 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 MTPNP58546 118 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 DDI2Q5TDH0 399 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 MBLAC2Q68D91 279 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 ZNF783Q6ZMS7 281 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 KCTD8Q6ZWB6 473 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 CDH24Q86UP0 819 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 GPR65Q8IYL9 337 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 C2CD4AQ8NCU7 369 aaPredicted RBP12.54□□□□□ -0.4
PTCD1-201ENST00000292478 NPLOC4Q8TAT6 608 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 FAR1Q8WVX9 515 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 LMLNQ96KR4 655 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 ZNF358Q9NW07 568 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 SPATA7Q9P0W8 599 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 TESMINQ9Y4I5 508 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 ZNF99A8MXY4 864 aaPredicted RBP12.54□□□□□ -0.4
PTCD1-201ENST00000292478 GJA9P57773 515 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 RAPSNQ13702 412 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 PLET1Q6UQ28 207 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 KIAA1191Q96A73 305 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 EMID1Q96A84 441 aaPredicted RBP12.54□□□□□ -0.4
PTCD1-201ENST00000292478 CGREF1Q99674 301 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 PDCD10Q9BUL8 212 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 DNAAF2Q9NVR5 837 aaKnown RBP12.54□□□□□ -0.4
PTCD1-201ENST00000292478 DHRS7Q9Y394 339 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 C9P02748 559 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 RB1P06400 928 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 WASP42768 502 aa12.54□□□□□ -0.4
PTCD1-201ENST00000292478 GRSF1Q12849 480 aaKnown RBP eCLIP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms