RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 SUV39H2Q9H5I1 410 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 TMEM30AQ9NV96 361 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 TMEM248Q9NWD8 314 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SOHLH2Q9NX45 425 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 DEC1Q9P2X7 70 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 MRPS7Q9Y2R9 242 aaKnown RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 ZCWPW2A0A1B0GU75 182 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 IQCMA0A1B0GVH7 501 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 HAS3O00219 553 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 KPNA4O00629 521 aaPredicted RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 NDUFB5O43674 189 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 PRKD3O94806 890 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 IFNA16P05015 189 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 TNFRSF1BP20333 461 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 PTGER3P43115 390 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 RAPSNQ13702 412 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 PHKG1Q16816 387 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 PAGE2BQ5JRK9 111 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 BROXQ5VW32 411 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 KLHDC10Q6PID8 442 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 TRAF7Q6Q0C0 670 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SMARCD3Q6STE5 483 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 MAMDC4Q6UXC1 1216 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 EIF3MQ7L2H7 374 aaKnown RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 ADI1Q9BV57 179 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 OR51B5Q9H339 312 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 ABCB9Q9NP78 766 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 GALNT8Q9NY28 637 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 TTC34A8MYJ7 566 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 PRAMEF11O60813 436 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 KRT8P05787 483 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 ACP5P13686 325 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 STC1P52823 247 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 NR1H2P55055 460 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 MS4A2Q01362 244 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 TRAF3Q13114 568 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 ABRAXAS2Q15018 415 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 GALNT18Q6P9A2 607 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 C16orf62Q7Z3J2 963 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SYVN1Q86TM6 617 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 PDSS2Q86YH6 399 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 ZDHHC21Q8IVQ6 265 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SLAIN1Q8ND83 568 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 GIPC3Q8TF64 312 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 CLP1Q92989 425 aaKnown RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 PLD4Q96BZ4 506 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 DPH2Q9BQC3 489 aaPredicted RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 SGIP1Q9BQI5 828 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 FAM192AQ9GZU8 254 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 AASDHPPTQ9NRN7 309 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 UBAP1Q9NZ09 502 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 EHD3Q9NZN3 535 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 USP22Q9UPT9 525 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 ARIH1Q9Y4X5 557 aaPredicted RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 COMMD3-BMI1R4GMX3 469 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SCN3AQ9NY46 2000 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 MAP1BP46821 2468 aaKnown RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 SDHDO14521 159 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 ZW10O43264 779 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 STC2O76061 302 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 S1PR4O95977 384 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 AZGP1P25311 298 aaKnown RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 SOX6P35712 828 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 RGRP47804 291 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 GSK3BP49841 420 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 LMAN2Q12907 356 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 BNIP2Q12982 314 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 UNC50Q53HI1 259 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 TECRLQ5HYJ1 363 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 MORN1Q5T089 497 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 KIAA0408Q6ZU52 694 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 PTCHD4Q6ZW05 846 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 GPR65Q8IYL9 337 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 SLC13A3Q8WWT9 602 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 CXorf40BQ96DE9 158 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 IMP4Q96G21 291 aaKnown RBP4.69□□□□□ -1.66
UBR1-201ENST00000290650 SORT1Q99523 831 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 AHSPQ9NZD4 102 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 AASSQ9UDR5 926 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 DPP7Q9UHL4 492 aa4.69□□□□□ -1.66
UBR1-201ENST00000290650 KERAO60938 352 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 THRBP10828 461 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 CD70P32970 193 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 CTSKP43235 329 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 DGKGP49619 791 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 CAP1Q01518 475 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 SMARCB1Q12824 385 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 PTCHD3Q3KNS1 767 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 C9orf64Q5T6V5 341 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 GDPD4Q6W3E5 623 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 SNX20Q7Z614 316 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 ARMC8Q8IUR7 673 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 SLC34A3Q8N130 599 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 FOXJ1Q92949 421 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 FUBP3Q96I24 572 aaKnown RBP eCLIP4.68□□□□□ -1.66
UBR1-201ENST00000290650 KCNS3Q9BQ31 491 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 BRINP2Q9C0B6 783 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 LINC00597Q9H2U6 94 aa4.68□□□□□ -1.66
UBR1-201ENST00000290650 SMPD3Q9NY59 655 aaPredicted RBP4.68□□□□□ -1.66
UBR1-201ENST00000290650 TPRKBQ9Y3C4 175 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms