RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 MID1O15344 667 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 CCL16O15467 120 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 ECDO95905 644 aaPredicted RBP15.06■□□□□ 0
SHROOM4-201ENST00000289292 IFNGP01579 166 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 ITGB1P05556 798 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 FGF3P11487 239 aaPredicted RBP15.06■□□□□ 0
SHROOM4-201ENST00000289292 GSK3BP49841 420 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 NDST2P52849 883 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 AP2S1P53680 142 aaPredicted RBP15.06■□□□□ 0
SHROOM4-201ENST00000289292 MAPK12P53778 367 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 SF1Q15637 639 aaKnown RBP15.06■□□□□ 0
SHROOM4-201ENST00000289292 CRY2Q49AN0 593 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 CLEC20AQ6ZU45 233 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 AQP12AQ8IXF9 295 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 OR10H4Q8NGA5 316 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 ISOC1Q96CN7 298 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 TMEM209Q96SK2 561 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 C3orf14Q9HBI5 128 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 ITM2CQ9NQX7 267 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 SIGLEC1Q9BZZ2 1709 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 PLIN4Q96Q06 1357 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 TRIM64CA6NLI5 447 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 GMFBP60983 142 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 SP2Q02086 613 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 TSTQ16762 297 aaKnown RBP15.06■□□□□ 0
SHROOM4-201ENST00000289292 FRRS1Q6ZNA5 592 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 LINGO2Q7L985 606 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 HID1Q8IV36 788 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 OR10G2Q8NGC3 310 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 YIPF4Q9BSR8 244 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 KCTD3Q9Y597 815 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 J3KR12 359 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 PSMD9O00233 223 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 CEBPGP53567 150 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 SLC18A1P54219 525 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 ZNF697Q5TEC3 545 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 NIPAL1Q6NVV3 410 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 JAZF1Q86VZ6 243 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 DDX1Q92499 740 aaKnown RBP15.06■□□□□ 0
SHROOM4-201ENST00000289292 OR51V1Q9H2C8 321 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 FBRSL1Q9HCM7 1045 aaKnown RBP15.06■□□□□ 0
SHROOM4-201ENST00000289292 IRAK3Q9Y616 596 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 MANSC4A6NHS7 340 aaPredicted RBP15.06■□□□□ 0
SHROOM4-201ENST00000289292 SLC22A1O15245 554 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 ENGP17813 658 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 EIF2B5Q13144 721 aaKnown RBP15.06■□□□□ 0
SHROOM4-201ENST00000289292 CLEC12AQ5QGZ9 265 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 KIAA1324Q6UXG2 1013 aaKnown RBP15.06■□□□□ 0
SHROOM4-201ENST00000289292 ZC3HC1Q86WB0 502 aaKnown RBP15.06■□□□□ 0
SHROOM4-201ENST00000289292 KBTBD7Q8WVZ9 684 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 UFD1Q92890 307 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 BIRC7Q96CA5 298 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 MIR1-1HGQ9H1L0 117 aa15.06■□□□□ 0
SHROOM4-201ENST00000289292 MCIDASD6RGH6 385 aa15.05■□□□□ 0
SHROOM4-201ENST00000289292 AXIN1O15169 862 aa15.05■□□□□ 0
SHROOM4-201ENST00000289292 C22orf31O95567 290 aa15.05■□□□□ 0
SHROOM4-201ENST00000289292 ALPIP09923 528 aa15.05■□□□□ 0
SHROOM4-201ENST00000289292 ZNF182P17025 639 aaPredicted RBP15.05■□□□□ 0
SHROOM4-201ENST00000289292 AIF1LQ9BQI0 150 aa15.05■□□□□ 0
SHROOM4-201ENST00000289292 POLR2J2Q9GZM3 115 aaKnown RBP15.05■□□□□ 0
SHROOM4-201ENST00000289292 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.05■□□□□ 0
SHROOM4-201ENST00000289292 SLC35F4A4IF30 521 aa15.05■□□□□ 0
SHROOM4-201ENST00000289292 SORBS2O94875 1100 aaKnown RBP15.05■□□□□ 0
SHROOM4-201ENST00000289292 CD247P20963 164 aa15.05■□□□□ 0
SHROOM4-201ENST00000289292 ALDH3A2P51648 485 aa15.05■□□□□ 0
SHROOM4-201ENST00000289292 SCARB2Q14108 478 aa15.05■□□□□ 0
SHROOM4-201ENST00000289292 PTPRCAPQ14761 206 aa15.05■□□□□ 0
SHROOM4-201ENST00000289292 OR4F3Q6IEY1 312 aa15.05■□□□□ 0
SHROOM4-201ENST00000289292 ZNF563Q8TA94 476 aa15.05■□□□□ 0
SHROOM4-201ENST00000289292 ING5Q8WYH8 240 aa15.05■□□□□ 0
SHROOM4-201ENST00000289292 NUSAP1Q9BXS6 441 aaKnown RBP15.05■□□□□ 0
SHROOM4-201ENST00000289292 TFB2MQ9H5Q4 396 aaKnown RBP15.05■□□□□ 0
SHROOM4-201ENST00000289292 PADI3Q9ULW8 664 aa15.05■□□□□ 0
SHROOM4-201ENST00000289292 CDC7O00311 574 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 GNB5O14775 395 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 AURKAO14965 403 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 ACOX3O15254 700 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 SLC7A4O43246 635 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 KDM4BO94953 1096 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 TPRG1LQ5T0D9 272 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 RBM23Q86U06 439 aaKnown RBP15.05■□□□□ -0
SHROOM4-201ENST00000289292 SNX33Q8WV41 574 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 TMCO6Q96DC7 493 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 TTPALQ9BTX7 342 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 SPIN1Q9Y657 262 aaPredicted RBP15.05■□□□□ -0
SHROOM4-201ENST00000289292 RGS8P57771 180 aaPredicted RBP15.05■□□□□ -0
SHROOM4-201ENST00000289292 ZFAND2BQ8WV99 257 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 GALPQ9UBC7 116 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 SPEF2Q9C093 1822 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 KAT6AQ92794 2004 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 A0A0G2JN53 185 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 KLF11O14901 512 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 SMPD1P17405 629 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 RPS3AP61247 264 aaKnown RBP15.05■□□□□ -0
SHROOM4-201ENST00000289292 MOGSQ13724 837 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 PCBP2Q15366 365 aaKnown RBP eCLIP15.05■□□□□ -0
SHROOM4-201ENST00000289292 POP5Q969H6 163 aaKnown RBP15.05■□□□□ -0
SHROOM4-201ENST00000289292 C8orf48Q96LL4 319 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 CCDC115Q96NT0 180 aa15.05■□□□□ -0
SHROOM4-201ENST00000289292 C1QTNF7Q9BXJ2 289 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms