RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 ZXDCQ2QGD7 858 aaPredicted RBP16.27■□□□□ 0.19
VPS54-201ENST00000272322 AASDHQ4L235 1098 aaPredicted RBP16.27■□□□□ 0.19
VPS54-201ENST00000272322 FGD3Q5JSP0 725 aa16.27■□□□□ 0.19
VPS54-201ENST00000272322 OR4F3Q6IEY1 312 aa16.27■□□□□ 0.19
VPS54-201ENST00000272322 CHST9Q7L1S5 443 aa16.27■□□□□ 0.19
VPS54-201ENST00000272322 NCSTNQ92542 709 aa16.27■□□□□ 0.19
VPS54-201ENST00000272322 TCEAL4Q96EI5 215 aa16.27■□□□□ 0.19
VPS54-201ENST00000272322 NUSAP1Q9BXS6 441 aaKnown RBP16.27■□□□□ 0.19
VPS54-201ENST00000272322 ELAC1Q9H777 363 aaKnown RBP16.27■□□□□ 0.19
VPS54-201ENST00000272322 MAGEE1Q9HCI5 957 aa16.27■□□□□ 0.19
VPS54-201ENST00000272322 PCDH12Q9NPG4 1184 aa16.27■□□□□ 0.19
VPS54-201ENST00000272322 GPRC5BQ9NZH0 403 aa16.27■□□□□ 0.19
VPS54-201ENST00000272322 LSM7Q9UK45 103 aaKnown RBP16.27■□□□□ 0.19
VPS54-201ENST00000272322 TMEM202A6NGA9 273 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 FZD6O60353 706 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 ANXA6P08133 673 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 BCKDHAP12694 445 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 PHC1P78364 1004 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 TNK2Q07912 1038 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 ATP6AP1Q15904 470 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 ARHGAP22Q7Z5H3 698 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 TRIM74Q86UV6 250 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 YME1L1Q96TA2 773 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 ARMC7Q9H6L4 198 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 SLC8A2Q9UPR5 921 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 TNPO3Q9Y5L0 923 aaKnown RBP16.26■□□□□ 0.19
VPS54-201ENST00000272322 OR51B4Q9Y5P0 310 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 HCFC2Q9Y5Z7 792 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 hCG_2039718K7EN88 272 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 RGS14O43566 566 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 MITFO75030 526 aaPredicted RBP16.26■□□□□ 0.19
VPS54-201ENST00000272322 ATE1O95260 518 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 SOD2P04179 222 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 AGXTP21549 392 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 SERPINA4P29622 427 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 PREPP48147 710 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 CLCN4P51793 760 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 CYP4F3Q08477 520 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 ANKDD1AQ495B1 522 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 CACHD1Q5VU97 1274 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 ZDHHC13Q8IUH4 622 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 TBC1D21Q8IYX1 336 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 NXPE1Q8N323 547 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 GTF2H4Q92759 462 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 ALG14Q96F25 216 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 APIPQ96GX9 242 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 ZNF558Q96NG5 402 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 BRINP2Q9C0B6 783 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 ZIM2Q9NZV7 527 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 PHF24Q9UPV7 400 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 PCDHB14Q9Y5E9 798 aa16.26■□□□□ 0.19
VPS54-201ENST00000272322 ATG2BQ96BY7 2078 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 K7EPI3 171 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 IFRD1O00458 451 aaPredicted RBP16.25■□□□□ 0.19
VPS54-201ENST00000272322 HOXA2O43364 376 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 GPIP06744 558 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 ENO2P09104 434 aaPredicted RBP16.25■□□□□ 0.19
VPS54-201ENST00000272322 CD247P20963 164 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 SPAM1P38567 509 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 SLC36A3Q495N2 470 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 C5orf22Q49AR2 442 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 PABPC1LQ4VXU2 614 aaKnown RBP16.25■□□□□ 0.19
VPS54-201ENST00000272322 FAM98BQ52LJ0 330 aaKnown RBP16.25■□□□□ 0.19
VPS54-201ENST00000272322 PDCD4Q53EL6 469 aaKnown RBP16.25■□□□□ 0.19
VPS54-201ENST00000272322 ZNF621Q6ZSS3 439 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 NETO1Q8TDF5 533 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 FAM120BQ96EK7 910 aaKnown RBP16.25■□□□□ 0.19
VPS54-201ENST00000272322 ACPTQ9BZG2 426 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 NTN4Q9HB63 628 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 IFT80Q9P2H3 777 aaPredicted RBP16.25■□□□□ 0.19
VPS54-201ENST00000272322 B4GALT6Q9UBX8 382 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 PTBP2Q9UKA9 531 aaKnown RBP16.25■□□□□ 0.19
VPS54-201ENST00000272322 A0A087WXM4 84 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 RASAL1O95294 804 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 IGSF6O95976 241 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 SERPINA1P01009 418 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 PIM1P11309 404 aaPredicted RBP16.25■□□□□ 0.19
VPS54-201ENST00000272322 PIGAP37287 484 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 SMARCB1Q12824 385 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 SLC14A1Q13336 389 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 ABRAXAS1Q6UWZ7 409 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 OR2AP1Q8NGE2 309 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 UHRF1Q96T88 793 aaPredicted RBP16.25■□□□□ 0.19
VPS54-201ENST00000272322 TOR3AQ9H497 397 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 HSFX1Q9UBD0 423 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 PDE10AQ9Y233 779 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 SAP18O00422 153 aaKnown RBP16.25■□□□□ 0.19
VPS54-201ENST00000272322 KLK8O60259 260 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 ABLIM3O94929 683 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 LRG1P02750 347 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 HIST1H2AGP0C0S8 130 aaPredicted RBP16.25■□□□□ 0.19
VPS54-201ENST00000272322 CSF2RAP15509 400 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 HIST1H2ADP20671 130 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 FSHRP23945 695 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 ALDH4A1P30038 563 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 CAPGP40121 348 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 ARSFP54793 590 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 NTHL1P78549 312 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 BNIP3Q12983 259 aa16.25■□□□□ 0.19
VPS54-201ENST00000272322 CCSMST1Q4G0I0 132 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms