RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 PCBP2Q15366 365 aaKnown RBP eCLIP26.93■■□□□ 1.94e-7■■■□□ 18.2
CBX4-201ENST00000269397 CARTPTQ16568 116 aa26.93■■□□□ 1.9
CBX4-201ENST00000269397 RUNDC3AQ59EK9 446 aa26.93■■□□□ 1.9
CBX4-201ENST00000269397 ZNF641Q96N77 438 aaPredicted RBP26.93■■□□□ 1.9
CBX4-201ENST00000269397 TRIT1Q9H3H1 467 aaKnown RBP26.93■■□□□ 1.9
CBX4-201ENST00000269397 KAT8Q9H7Z6 458 aaKnown RBP26.93■■□□□ 1.9
CBX4-201ENST00000269397 RAI2Q9Y5P3 530 aa26.93■■□□□ 1.9
CBX4-201ENST00000269397 IFRD1O00458 451 aaPredicted RBP26.92■■□□□ 1.9
CBX4-201ENST00000269397 AREL1O15033 823 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 TLR5O60602 858 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 CCDC159P0C7I6 412 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 MASP1P48740 699 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 CARD16Q5EG05 197 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 CATSPEREQ5SY80 951 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 CEP68Q76N32 757 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 GALNT10Q86SR1 603 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 P2RY8Q86VZ1 359 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 CHPFQ8IZ52 775 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 EGFL8Q99944 293 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 ZFP37Q9Y6Q3 630 aaPredicted RBP26.92■■□□□ 1.9
CBX4-201ENST00000269397 F5H5T6 163 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 TAPBPO15533 448 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 C1QCP02747 245 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 GSTT2P0CG29 244 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 GSTT2BP0CG30 244 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 MORN1Q5T089 497 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 ALG1LQ6GMV1 187 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 GPR149Q86SP6 731 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 PIK3C3Q8NEB9 887 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 FAM120BQ96EK7 910 aaKnown RBP26.92■■□□□ 1.9
CBX4-201ENST00000269397 PARK7Q99497 189 aaKnown RBP26.92■■□□□ 1.9
CBX4-201ENST00000269397 PRDM8Q9NQV8 689 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 SLC45A1Q9Y2W3 748 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 ANGPTL3Q9Y5C1 460 aa26.92■■□□□ 1.9
CBX4-201ENST00000269397 GPC6Q9Y625 555 aaPredicted RBP26.92■■□□□ 1.9
CBX4-201ENST00000269397 MYO1GB0I1T2 1018 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 SLC22A1O15245 554 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 SLC16A6O15403 523 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 S100BP04271 92 aaPredicted RBP26.91■■□□□ 1.9
CBX4-201ENST00000269397 EPHA2P29317 976 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 RYKP34925 604 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 PHC1P78364 1004 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 DGUOKQ16854 277 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 SLC22A16Q86VW1 577 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 S100ZQ8WXG8 99 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 UBE2FQ969M7 185 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 SPC25Q9HBM1 224 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 MAGEE1Q9HCI5 957 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 VPS9D1Q9Y2B5 631 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 PKP3Q9Y446 797 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 CBX4O00257 560 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 ZNF682O95780 498 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 MT-ND2P03891 347 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 INPP5KQ9BT40 448 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 ABCG2Q9UNQ0 655 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 TSC22D4Q9Y3Q8 395 aa26.91■■□□□ 1.9
CBX4-201ENST00000269397 ANKRD66B4E2M5 251 aa26.9■■□□□ 1.9
CBX4-201ENST00000269397 PRAMEF12O95522 483 aa26.9■■□□□ 1.9
CBX4-201ENST00000269397 PAGE2Q7Z2X7 111 aa26.9■■□□□ 1.9
CBX4-201ENST00000269397 OR6Q1Q8NGQ2 317 aa26.9■■□□□ 1.9
CBX4-201ENST00000269397 C8orf48Q96LL4 319 aa26.9■■□□□ 1.9
CBX4-201ENST00000269397 AGO1Q9UL18 857 aaKnown RBP26.9■■□□□ 1.9
CBX4-201ENST00000269397 ZNF490Q9ULM2 529 aaPredicted RBP26.9■■□□□ 1.9
CBX4-201ENST00000269397 TNPO3Q9Y5L0 923 aaKnown RBP26.9■■□□□ 1.9
CBX4-201ENST00000269397 A8MU76 341 aa26.9■■□□□ 1.9
CBX4-201ENST00000269397 RGS14O43566 566 aa26.9■■□□□ 1.9
CBX4-201ENST00000269397 OR1G1P47890 313 aa26.9■■□□□ 1.9
CBX4-201ENST00000269397 CLK3P49761 638 aaKnown RBP26.9■■□□□ 1.9
CBX4-201ENST00000269397 CLCA4Q14CN2 919 aa26.9■■□□□ 1.9
CBX4-201ENST00000269397 LINGO4Q6UY18 593 aa26.9■■□□□ 1.9
CBX4-201ENST00000269397 RGL4Q8IZJ4 473 aa26.9■■□□□ 1.9
CBX4-201ENST00000269397 CIPCQ9C0C6 399 aa26.9■■□□□ 1.9
CBX4-201ENST00000269397 RASSF1Q9NS23 344 aa26.9■■□□□ 1.9
CBX4-201ENST00000269397 PFDN6O15212 129 aa26.89■■□□□ 1.9
CBX4-201ENST00000269397 MGAT3Q09327 533 aa26.89■■□□□ 1.9
CBX4-201ENST00000269397 GBX1Q14549 363 aa26.89■■□□□ 1.9
CBX4-201ENST00000269397 PHKG1Q16816 387 aa26.89■■□□□ 1.9
CBX4-201ENST00000269397 VARS2Q5ST30 1063 aaKnown RBP26.89■■□□□ 1.9
CBX4-201ENST00000269397 ZDHHC21Q8IVQ6 265 aa26.89■■□□□ 1.9
CBX4-201ENST00000269397 CLDN19Q8N6F1 224 aa26.89■■□□□ 1.9
CBX4-201ENST00000269397 ZNF540Q8NDQ6 660 aa26.89■■□□□ 1.9
CBX4-201ENST00000269397 PSMA8Q8TAA3 256 aa26.89■■□□□ 1.9
CBX4-201ENST00000269397 YIPF6Q96EC8 236 aa26.89■■□□□ 1.9
CBX4-201ENST00000269397 BOCQ9BWV1 1114 aa26.89■■□□□ 1.9
CBX4-201ENST00000269397 ABCG8Q9H221 673 aa26.89■■□□□ 1.9
CBX4-201ENST00000269397 CA5AP35218 305 aa26.89■■□□□ 1.89
CBX4-201ENST00000269397 SLC13A2Q13183 592 aa26.89■■□□□ 1.89
CBX4-201ENST00000269397 C1QTNF12Q5T7M4 302 aa26.89■■□□□ 1.89
CBX4-201ENST00000269397 CPZQ66K79 652 aa26.89■■□□□ 1.89
CBX4-201ENST00000269397 PLEKHG7Q6ZR37 379 aa26.89■■□□□ 1.89
CBX4-201ENST00000269397 DYNC2LI1Q8TCX1 351 aa26.89■■□□□ 1.89
CBX4-201ENST00000269397 PYURFQ96I23 114 aa26.89■■□□□ 1.89
CBX4-201ENST00000269397 SEPT5Q99719 369 aaPredicted RBP26.89■■□□□ 1.89
CBX4-201ENST00000269397 VPS51Q9UID3 782 aa26.89■■□□□ 1.89
CBX4-201ENST00000269397 PCDHB5Q9Y5E4 795 aa26.89■■□□□ 1.89
CBX4-201ENST00000269397 IGLV3-27P01718 113 aa26.88■■□□□ 1.89
CBX4-201ENST00000269397 GNPDA1P46926 289 aa26.88■■□□□ 1.89
CBX4-201ENST00000269397 NRIP1P48552 1158 aa26.88■■□□□ 1.89
CBX4-201ENST00000269397 DAPP51397 102 aa26.88■■□□□ 1.89
CBX4-201ENST00000269397 SLC35A2P78381 396 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms