RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 ELFN1P0C7U0 828 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 ZCCHC18P0CG32 403 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 HIST1H2ADP20671 130 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 SOX11P35716 441 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 GGT5P36269 586 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 MED21Q13503 144 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 ZNF284Q2VY69 593 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 PTCHD3Q3KNS1 767 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 CDKL4Q5MAI5 379 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 FBXL19Q6PCT2 694 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 GALNT4Q8N4A0 578 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 CHCHD4Q8N4Q1 142 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 WFIKKN2Q8TEU8 576 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 HIST1H2AHQ96KK5 128 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 HIST1H2AJQ99878 128 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 H2AFJQ9BTM1 129 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 ZSCAN5AQ9BUG6 496 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 ZFP14Q9HCL3 533 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 DPP7Q9UHL4 492 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 SLC28A1O00337 649 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 CLDN9O95484 217 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 GSK3BP49841 420 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 CTSCP53634 463 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 CDKL1Q00532 357 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 PTGR1Q14914 329 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 NANOGP8Q6NSW7 305 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 TRIM46Q7Z4K8 759 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 ETFBKMTQ8IXQ9 262 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 BTN2A2Q8WVV5 523 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 DUS3LQ96G46 650 aaKnown RBP16.48■□□□□ 0.23
CHKA-201ENST00000265689 LRIG1Q96JA1 1093 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 NANOGQ9H9S0 305 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 CNOT6Q9ULM6 557 aaKnown RBP16.48■□□□□ 0.23
CHKA-201ENST00000265689 SLC27A6Q9Y2P4 619 aa16.48■□□□□ 0.23
CHKA-201ENST00000265689 INPP4BO15327 924 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 CAPNS1P04632 268 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 POU2F2P09086 479 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 NFKBIAP25963 317 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 PLIN5Q00G26 463 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 LIPEQ05469 1076 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 IMPG1Q17R60 797 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 GAB4Q2WGN9 574 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 NEK5Q6P3R8 708 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 AMIGO2Q86SJ2 522 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 NPAS3Q8IXF0 933 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 RASGEF1AQ8N9B8 481 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 BPIFB1Q8TDL5 484 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 ZUFSPQ96AP4 578 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 BTBD9Q96Q07 612 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 YIPF3Q9GZM5 350 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 ATG10Q9H0Y0 220 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 TMEM45AQ9NWC5 275 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 USP22Q9UPT9 525 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 COQ6Q9Y2Z9 468 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 SNX13Q9Y5W8 968 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 PLXNA2O75051 1894 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 WDFY4Q6ZS81 3184 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 PLK4O00444 970 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 TSPAN6O43657 245 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 SEC22BO75396 215 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 TIPRLO75663 272 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 AP2A2O94973 939 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 ITPKAP23677 461 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 GNPDA1P46926 289 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 VASPP50552 380 aaPredicted RBP16.47■□□□□ 0.23
CHKA-201ENST00000265689 ABRQ12979 859 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 DUSP6Q16828 381 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 FNDC3BQ53EP0 1204 aaKnown RBP16.47■□□□□ 0.23
CHKA-201ENST00000265689 ERAP2Q6P179 960 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 RAVER1Q8IY67 606 aaKnown RBP16.47■□□□□ 0.23
CHKA-201ENST00000265689 LILRA3Q8N6C8 439 aaPredicted RBP16.47■□□□□ 0.23
CHKA-201ENST00000265689 CATSPER1Q8NEC5 780 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 FGF13Q92913 245 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 FOXJ1Q92949 421 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 USP7Q93009 1102 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 AP2M1Q96CW1 435 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 VCXQ9H320 206 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 ALG2Q9H553 416 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 PIF1Q9H611 641 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 LRTM1Q9HBL6 345 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 EIF3LQ9Y262 564 aaKnown RBP16.47■□□□□ 0.23
CHKA-201ENST00000265689 SLC22A14Q9Y267 594 aa16.47■□□□□ 0.23
CHKA-201ENST00000265689 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.46■□□□□ 0.23
CHKA-201ENST00000265689 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.46■□□□□ 0.23
CHKA-201ENST00000265689 PABPN1LA6NDY0 278 aaKnown RBP16.46■□□□□ 0.23
CHKA-201ENST00000265689 KPNA5O15131 536 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 ARPC2O15144 300 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 PDYNP01213 254 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 FTH1P02794 183 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 MTHFD1P11586 935 aaKnown RBP16.46■□□□□ 0.23
CHKA-201ENST00000265689 CYP2A7P20853 494 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 SLC6A12P48065 614 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 NEK2P51955 445 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 BNIP2Q12982 314 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 HMBOX1Q6NT76 420 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 DLEU7Q6UYE1 221 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 LRRC70Q7Z2Q7 622 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 LIX1Q8N485 282 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 MCOLN3Q8TDD5 553 aa16.46■□□□□ 0.23
CHKA-201ENST00000265689 ASZ1Q8WWH4 475 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms