RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 FRMD1Q8N878 549 aa22.31■■□□□ 1.16
SMARCB1-201ENST00000263121 BIRC7Q96CA5 298 aa22.31■■□□□ 1.16
SMARCB1-201ENST00000263121 PPP1R36Q96LQ0 422 aa22.31■■□□□ 1.16
SMARCB1-201ENST00000263121 IPPKQ9H8X2 491 aa22.31■■□□□ 1.16
SMARCB1-201ENST00000263121 DMTF1Q9Y222 760 aa22.31■■□□□ 1.16
SMARCB1-201ENST00000263121 GOLGA8QA0A0J9YX86 632 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 GOLGA8OA6NCC3 632 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 GOLGA8NF8WBI6 632 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 PRAMEF26H0Y7S4 382 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 KCNJ13O60928 360 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 OTCP00480 354 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 ACP5P13686 325 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 KELP23276 732 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 YPEL5P62699 121 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 PTCHD3Q3KNS1 767 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 LSM12Q3MHD2 195 aaKnown RBP22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 TPRG1LQ5T0D9 272 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 METTL21CQ5VZV1 264 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 LETMD1Q6P1Q0 360 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 ACAD11Q709F0 780 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 KLHDC8AQ8IYD2 350 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 SPDYE1Q8NFV5 336 aaPredicted RBP22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 RLN3Q8WXF3 142 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 ATL1Q8WXF7 558 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 WDR92Q96MX6 357 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 PKP4Q99569 1192 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 NUSAP1Q9BXS6 441 aaKnown RBP22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 STOX2Q9P2F5 926 aaPredicted RBP22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 ACSL5Q9ULC5 683 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 ANGPTL3Q9Y5C1 460 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 PRSS38A1L453 326 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 MYO1CO00159 1063 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 STK25O00506 426 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 TOR1BO14657 336 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 GIPC1O14908 333 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 OR4F21O95013 312 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 UROSP10746 265 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 EPB42P16452 691 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 NUDT1P36639 197 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 MTAPQ13126 283 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 ABI3BPQ7Z7G0 1075 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 FAM160A2Q8N612 972 aaPredicted RBP22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 TWIST2Q8WVJ9 160 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 SAR1AQ9NR31 198 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 SLC12A4Q9UP95 1085 aa22.3■■□□□ 1.16
SMARCB1-201ENST00000263121 EPORP19235 508 aa22.29■■□□□ 1.16
SMARCB1-201ENST00000263121 CCNG1P51959 295 aa22.29■■□□□ 1.16
SMARCB1-201ENST00000263121 CDC16Q13042 620 aa22.29■■□□□ 1.16
SMARCB1-201ENST00000263121 CAMKK1Q8N5S9 505 aa22.29■■□□□ 1.16
SMARCB1-201ENST00000263121 OR4F6Q8NGB9 312 aa22.29■■□□□ 1.16
SMARCB1-201ENST00000263121 ACTRT2Q8TDY3 377 aa22.29■■□□□ 1.16
SMARCB1-201ENST00000263121 OR1E3Q8WZA6 343 aa22.29■■□□□ 1.16
SMARCB1-201ENST00000263121 C19orf60Q96EN9 201 aa22.29■■□□□ 1.16
SMARCB1-201ENST00000263121 CDK15Q96Q40 435 aa22.29■■□□□ 1.16
SMARCB1-201ENST00000263121 NTMT1Q9BV86 223 aa22.29■■□□□ 1.16
SMARCB1-201ENST00000263121 CD320Q9NPF0 282 aa22.29■■□□□ 1.16
SMARCB1-201ENST00000263121 MOSPD1Q9UJG1 213 aa22.29■■□□□ 1.16
SMARCB1-201ENST00000263121 SIT1Q9Y3P8 196 aa22.29■■□□□ 1.16
SMARCB1-201ENST00000263121 COL6A3P12111 3177 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 CRCPO75575 148 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 WDR47O94967 919 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 HTR1BP28222 390 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 IMPA1P29218 277 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 GNPDA1P46926 289 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 CAPRIN2Q6IMN6 1127 aaKnown RBP22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 AGTRAPQ6RW13 159 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 ENPP7Q6UWV6 458 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 ATP6V1E2Q96A05 226 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 OR2M4Q96R27 311 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 CCDC106Q9BWC9 280 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 TUBB1Q9H4B7 451 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 ARMCX1Q9P291 453 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 PSMD13Q9UNM6 376 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 PLEKHM1Q9Y4G2 1056 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 GPSM3Q9Y4H4 160 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 TIMM22Q9Y584 194 aa22.28■■□□□ 1.16
SMARCB1-201ENST00000263121 E9PBE3 544 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 TNFRSF10CO14798 259 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 KLHL41O60662 606 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 KATNA1O75449 491 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 SLC16A8O95907 504 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 PXNP49023 591 aaPredicted RBP22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 EFL1Q7Z2Z2 1120 aaKnown RBP22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 CHCHD4Q8N4Q1 142 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 DCBLD1Q8N8Z6 715 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 OR9A1PQ8NGU1 263 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 TFGQ92734 400 aaPredicted RBP22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 PYCR2Q96C36 320 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 PDXPQ96GD0 296 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 ORAI3Q9BRQ5 295 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 ATG10Q9H0Y0 220 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 CARS2Q9HA77 564 aaKnown RBP22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 DNAJC11Q9NVH1 559 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 TRIM33Q9UPN9 1127 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 KCNK6Q9Y257 313 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 ASF1AQ9Y294 204 aa22.27■■□□□ 1.16
SMARCB1-201ENST00000263121 CAPN14A8MX76 684 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 PIP5K1BO14986 540 aa22.26■■□□□ 1.15
SMARCB1-201ENST00000263121 ENO1P06733 434 aaKnown RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms