RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 SSX6Q7RTT6 188 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 CAND1Q86VP6 1230 aaKnown RBP12.65□□□□□ -0.38
TTC39A-202ENST00000262676 C17orf64Q86WR6 236 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 SLC22A15Q8IZD6 547 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 NAXEQ8NCW5 288 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 ANKRA2Q9H9E1 313 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 BRD7Q9NPI1 651 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 FBXL3Q9UKT7 428 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 CDH7Q9ULB5 785 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 GPR89AB7ZAQ6 455 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 H3BNX3 289 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 H3BSH0 61 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 CYP1A2P05177 515 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 FESP07332 822 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 ELFN1P0C7U0 828 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 GPR89BP0CG08 455 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 GNSP15586 552 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 PEX2P28328 305 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 ZNF143P52747 638 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-202ENST00000262676 CNPY1Q3B7I2 92 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 CERCAMQ5T4B2 595 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 GALNT11Q8NCW6 608 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 SMPDL3BQ92485 455 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 SEC14L1Q92503 715 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 SLC38A4Q969I6 547 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 SLC7A6OSQ96CW6 309 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-202ENST00000262676 LMLNQ96KR4 655 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 VWA7Q9Y334 891 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 SQORQ9Y6N5 450 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 KCPQ6ZWJ8 1503 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 ACVR2AP27037 513 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 AQP4P55087 323 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 MLLT6P55198 1093 aaPredicted RBP12.65□□□□□ -0.38
TTC39A-202ENST00000262676 INAVAQ3KP66 663 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 C9orf57Q5W0N0 161 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 ANKRD46Q86W74 232 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 CFAP206Q8IYR0 622 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 CENPSQ8N2Z9 138 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 ARMC5Q96C12 935 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 IFT27Q9BW83 186 aa12.65□□□□□ -0.38
TTC39A-202ENST00000262676 CCDC163A0A0D9SF12 145 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 TRIM64BA6NI03 449 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 RHPN2P1A8MT19 583 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 MARCKSL1P49006 195 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 GDI2P50395 445 aaKnown RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 TUBA3CQ13748 450 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 ZNF267Q14586 743 aaPredicted RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 PLEKHG4Q58EX7 1191 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 RBFAQ8N0V3 343 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 OR5B17Q8NGF7 314 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 THAP6Q8TBB0 222 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 CLP1Q92989 425 aaKnown RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 NMUR2Q9GZQ4 415 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 KAT8Q9H7Z6 458 aaKnown RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 FANCFQ9NPI8 374 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 DDX6P26196 483 aaKnown RBP eCLIP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 ACSL1P33121 698 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 VMACQ2NL98 169 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 PUS10Q3MIT2 529 aaKnown RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 CAPN13Q6MZZ7 669 aaPredicted RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 FAM92BQ6ZTR7 304 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 ZNF431Q8TF32 576 aaPredicted RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 PTPN18Q99952 460 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 ARHGEF4Q9NR80 690 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 AGO1Q9UL18 857 aaKnown RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 DAPL1A0PJW8 107 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 PRMT5O14744 637 aaPredicted RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 CYP17A1P05093 508 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 KIR3DL1P43629 444 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 LPAL2Q16609 132 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 LINGO4Q6UY18 593 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 POP5Q969H6 163 aaKnown RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 BARD1Q99728 777 aaKnown RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 DUSP9Q99956 384 aaKnown RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 EBF3Q9H4W6 596 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 TXNRD2Q9NNW7 524 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 NUDT15Q9NV35 164 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 FBXW2Q9UKT8 454 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 IFNA21P01568 189 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 GNPDA1P46926 289 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 GATMP50440 423 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 RPA4Q13156 261 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 CNKSR3Q6P9H4 555 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 LIX1Q8N485 282 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 DCBLD1Q8N8Z6 715 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 OR6K6Q8NGW6 343 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 COQ8AQ8NI60 647 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 PRDM12Q9H4Q4 367 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 RDH8Q9NYR8 311 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 MTRRQ9UBK8 725 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 PRDM4Q9UKN5 801 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 FBXO5Q9UKT4 447 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 YARS2Q9Y2Z4 477 aaKnown RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 SMIM28A0A1B0GU29 152 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 FGF19O95750 216 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 ZNF16P17020 682 aaPredicted RBP12.64□□□□□ -0.39
TTC39A-202ENST00000262676 MAP3K8P41279 467 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 KCNJ5P48544 419 aa12.64□□□□□ -0.39
TTC39A-202ENST00000262676 TUBA1BP68363 451 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms