RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 CNOT6Q9ULM6 557 aaKnown RBP12.64□□□□□ -0.39
SPTLC1-201ENST00000262554 SNX13Q9Y5W8 968 aa12.64□□□□□ -0.39
SPTLC1-201ENST00000262554 PDE4DIPQ5VU43 2346 aa12.64□□□□□ -0.39
SPTLC1-201ENST00000262554 FADS2P1A8MWK0 482 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 ANKRD28O15084 1053 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 SEC22BO75396 215 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 PRNPP04156 253 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 EN2P19622 333 aaPredicted RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 PSMA4P25789 261 aaKnown RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 VIPR2P41587 438 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 SLC6A12P48065 614 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 GSK3BP49841 420 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 LBX1P52954 281 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 HMGCS1Q01581 520 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 LIPEQ05469 1076 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 ACOX1Q15067 660 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 PDK3Q15120 406 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 GGTA1PQ4G0N0 100 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 AASDHQ4L235 1098 aaPredicted RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 NANOGP8Q6NSW7 305 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 SLC2A7Q6PXP3 512 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 TMEM92Q6UXU6 159 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 LIPIQ6XZB0 460 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 PARS2Q7L3T8 475 aaKnown RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 PTRH1Q86Y79 214 aaKnown RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 SPPL2CQ8IUH8 684 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 HID1Q8IV36 788 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 RAVER1Q8IY67 606 aaKnown RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 KIAA2013Q8IYS2 634 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 NRSN1Q8IZ57 195 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 RGL4Q8IZJ4 473 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 CANT1Q8WVQ1 401 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 PPWD1Q96BP3 646 aaKnown RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 SEMA6AQ9H2E6 1030 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 ACTL8Q9H568 366 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 NANOGQ9H9S0 305 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 CCM2LQ9NUG4 571 aaPredicted RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 C1orf109Q9NX04 203 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 ASIC5Q9NY37 505 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 SNX6Q9UNH7 406 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 DHRS12A0PJE2 317 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 OR2AG2A6NM03 316 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 PSMD11O00231 422 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 KPNA3O00505 521 aaPredicted RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 ARPC2O15144 300 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 HNRNPRO43390 633 aaKnown RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 SGTAO43765 313 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 SLCO2B1O94956 709 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 NFATC1O95644 943 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 ZCCHC18P0CG32 403 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 EPORP19235 508 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 IL10P22301 178 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 YBX1P67809 324 aaKnown RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 GPM6BQ13491 265 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 CPSF6Q16630 551 aaKnown RBP eCLIP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 PTCHD3Q3KNS1 767 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 SYTL3Q4VX76 610 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 FNDC3BQ53EP0 1204 aaKnown RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 IFNEQ86WN2 208 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 GALNT4Q8N4A0 578 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 BEND7Q8N7W2 519 aaPredicted RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 C12orf76Q8N812 135 aaPredicted RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 GLB1L3Q8NCI6 653 aaPredicted RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 BPIFB1Q8TDL5 484 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 GLYATL1Q969I3 302 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 AP2M1Q96CW1 435 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 RSPRY1Q96DX4 576 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 MAGEB10Q96LZ2 347 aaPredicted RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 P2RY13Q9BPV8 354 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 TRIM8Q9BZR9 551 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 DPY30Q9C005 99 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 ELOVL6Q9H5J4 265 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 DNAJC11Q9NVH1 559 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 INTS7Q9NVH2 962 aaKnown RBP12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 SLAMF8Q9P0V8 285 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 ZNHIT2Q9UHR6 403 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 METRNQ9UJH8 293 aa12.63□□□□□ -0.39
SPTLC1-201ENST00000262554 ZFC3H1O60293 1989 aaKnown RBP12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 WNT9AO14904 365 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 AKAP10O43572 662 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 ATG13O75143 517 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 PDYNP01213 254 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 MAP4P27816 1152 aaKnown RBP12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 DGKQP52824 942 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 PWP1Q13610 501 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 GRIN2CQ14957 1233 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 TBCELQ5QJ74 424 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 ZNF648Q5T619 568 aaPredicted RBP12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 OR52E8Q6IFG1 317 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 FBXL19Q6PCT2 694 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 TMC5Q6UXY8 1006 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 ADGRD2Q7Z7M1 963 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 ETFBKMTQ8IXQ9 262 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 LIX1Q8N485 282 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 MARVELD2Q8N4S9 558 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 SELENOMQ8WWX9 145 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 TMEM159Q96B96 161 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 MTFMTQ96DP5 389 aaKnown RBP12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 TMEM74Q96NL1 305 aa12.62□□□□□ -0.39
SPTLC1-201ENST00000262554 ZFP14Q9HCL3 533 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms