RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 FBXO44Q9H4M3 255 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 EPS8L2Q9H6S3 715 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 PDFQ9HBH1 243 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 UBA2Q9UBT2 640 aaPredicted RBP17.11■□□□□ 0.33
TRAM1-201ENST00000262213 CBX4O00257 560 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 MYO1DO94832 1006 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 SCELO95171 688 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 TGM1P22735 817 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 HOXD9P28356 352 aaPredicted RBP17.1■□□□□ 0.33
TRAM1-201ENST00000262213 RPS24P62847 133 aaKnown RBP17.1■□□□□ 0.33
TRAM1-201ENST00000262213 TRAF3Q13114 568 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 PRR23BQ6ZRT6 265 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 CEP68Q76N32 757 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 PPP3R2Q96LZ3 170 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 DACH2Q96NX9 599 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 CORO1BQ9BR76 489 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 DCAF13Q9NV06 445 aaKnown RBP17.1■□□□□ 0.33
TRAM1-201ENST00000262213 NUDT4Q9NZJ9 180 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 NOD1Q9Y239 953 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 GREB1Q4ZG55 1949 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 MOXD2PA6NHM9 499 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 DRGXA6NNA5 263 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 hCG_2039718K7EN88 272 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 INSIG1O15503 277 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 FFAR2O15552 330 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 OXSR1O95747 527 aaPredicted RBP17.1■□□□□ 0.33
TRAM1-201ENST00000262213 OTCP00480 354 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 SERPINB10P48595 397 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 MASP1P48740 699 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 YBEYP58557 167 aaPredicted RBP17.1■□□□□ 0.33
TRAM1-201ENST00000262213 CARD16Q5EG05 197 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 SUSD1Q6UWL2 747 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 INPP5KQ9BT40 448 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 MIR1-1HGQ9H1L0 117 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 ELOVL2Q9NXB9 296 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 ZNF490Q9ULM2 529 aaPredicted RBP17.1■□□□□ 0.33
TRAM1-201ENST00000262213 RAI2Q9Y5P3 530 aa17.1■□□□□ 0.33
TRAM1-201ENST00000262213 GRXCR2A6NFK2 248 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 F5H5T6 163 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 SLC22A1O15245 554 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 C1QCP02747 245 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 EPHA2P29317 976 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 CD6P30203 668 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 SEPHS1P49903 392 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 CLCA4Q14CN2 919 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 ZNF362Q5T0B9 420 aaPredicted RBP17.09■□□□□ 0.33
TRAM1-201ENST00000262213 LINGO4Q6UY18 593 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 PLD3Q8IV08 490 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 ZDHHC21Q8IVQ6 265 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 OR6Q1Q8NGQ2 317 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 SEPT5Q99719 369 aaPredicted RBP17.09■□□□□ 0.33
TRAM1-201ENST00000262213 ASPSCR1Q9BZE9 553 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRAM1-201ENST00000262213 POU2F3Q9UKI9 436 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 ABCG2Q9UNQ0 655 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 PKP3Q9Y446 797 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 GOLGA8CPA6NN73 597 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 RGS14O43566 566 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 FAM20BO75063 409 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 LRATO95237 230 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 OR1G1P47890 313 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 RUNDC3AQ59EK9 446 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 MBOAT1Q6ZNC8 495 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 PLEKHG7Q6ZR37 379 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 MRPL10Q7Z7H8 261 aaKnown RBP17.09■□□□□ 0.33
TRAM1-201ENST00000262213 SLC22A15Q8IZD6 547 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 MGME1Q9BQP7 344 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 TRIT1Q9H3H1 467 aaKnown RBP17.09■□□□□ 0.33
TRAM1-201ENST00000262213 WWOXQ9NZC7 414 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 GMPPBQ9Y5P6 360 aa17.09■□□□□ 0.33
TRAM1-201ENST00000262213 ZFP37Q9Y6Q3 630 aaPredicted RBP17.09■□□□□ 0.33
TRAM1-201ENST00000262213 H0Y626 953 aa17.08■□□□□ 0.33
TRAM1-201ENST00000262213 PFDN6O15212 129 aa17.08■□□□□ 0.33
TRAM1-201ENST00000262213 TRIM16O95361 564 aa17.08■□□□□ 0.33
TRAM1-201ENST00000262213 CCDC159P0C7I6 412 aa17.08■□□□□ 0.33
TRAM1-201ENST00000262213 CTPS1P17812 591 aa17.08■□□□□ 0.33
TRAM1-201ENST00000262213 SLC6A4P31645 630 aa17.08■□□□□ 0.33
TRAM1-201ENST00000262213 RCVRNP35243 200 aa17.08■□□□□ 0.33
TRAM1-201ENST00000262213 CLK3P49761 638 aaKnown RBP17.08■□□□□ 0.33
TRAM1-201ENST00000262213 TWF1Q12792 350 aa17.08■□□□□ 0.33
TRAM1-201ENST00000262213 KCNJ8Q15842 424 aa17.08■□□□□ 0.33
TRAM1-201ENST00000262213 CACHD1Q5VU97 1274 aa17.08■□□□□ 0.33
TRAM1-201ENST00000262213 PTRHD1Q6GMV3 140 aaKnown RBP17.08■□□□□ 0.33
TRAM1-201ENST00000262213 SBSNQ6UWP8 590 aa17.08■□□□□ 0.33
TRAM1-201ENST00000262213 VMP1Q96GC9 406 aa17.08■□□□□ 0.33
TRAM1-201ENST00000262213 ZNF641Q96N77 438 aaPredicted RBP17.08■□□□□ 0.33
TRAM1-201ENST00000262213 IFRD1O00458 451 aaPredicted RBP17.08■□□□□ 0.32
TRAM1-201ENST00000262213 LCKP06239 509 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 CLCN7P51798 805 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 ILF2Q12905 390 aaKnown RBP17.08■□□□□ 0.32
TRAM1-201ENST00000262213 MAP2K5Q13163 448 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 HIST2H2ACQ16777 129 aaPredicted RBP17.08■□□□□ 0.32
TRAM1-201ENST00000262213 SYT16Q17RD7 645 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 C9orf131Q5VYM1 1079 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 GPR149Q86SP6 731 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 HIPK1Q86Z02 1210 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 RGL4Q8IZJ4 473 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 CLDN19Q8N6F1 224 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 PIK3C3Q8NEB9 887 aa17.08■□□□□ 0.32
TRAM1-201ENST00000262213 KCNJ9Q92806 393 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms