RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 FDXRP22570 491 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 RBMS1P29558 406 aaKnown RBP18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 MLLT3P42568 568 aaPredicted RBP18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 ABCG1P45844 678 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 LSSP48449 732 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 POU4F1Q01851 419 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 C3orf38Q5JPI3 329 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 CYB5D1Q6P9G0 228 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 ZNF574Q6ZN55 896 aaPredicted RBP18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 B3GNT8Q7Z7M8 397 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 CPNE9Q8IYJ1 553 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 CARFQ8N187 725 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 FBXO39Q8N4B4 442 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 LRRN4CLQ8ND94 238 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 JPH3Q8WXH2 748 aaPredicted RBP18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 UBXN4Q92575 508 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 RBBP8Q99708 897 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 POPDC3Q9HBV1 291 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 SMYD2Q9NRG4 433 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 KLHL3Q9UH77 587 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 TSR3Q9UJK0 312 aaKnown RBP18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 MED16Q9Y2X0 877 aa18.21■□□□□ 0.51
CYSTM1-201ENST00000261811 NCOR2Q9Y618 2525 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 A0A087WUV0 522 aaPredicted RBP18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 GSAPA4D1B5 854 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 ZNF839A8K0R7 811 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 A8MU76 341 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 PLD2O14939 933 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 CASC3O15234 703 aaKnown RBP18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 PSIP1O75475 530 aaKnown RBP18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 C1orf105O95561 183 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 ANKRD34CP0C6C1 535 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 POLR2CP19387 275 aaPredicted RBP18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 MPSTP25325 297 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 TNFRSF8P28908 595 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 ARL4DP49703 201 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 RAB28P51157 221 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 PDX1P52945 283 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 CDKN2DP55273 166 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 GABREP78334 506 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 CFHR1Q03591 330 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 CAMK2BQ13554 666 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 RTP5Q14D33 572 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 CACHD1Q5VU97 1274 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 FOXR1Q6PIV2 292 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 PAQR3Q6TCH7 311 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 TAOK1Q7L7X3 1001 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 TMPRSS9Q7Z410 1059 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 NKAPQ8N5F7 415 aaKnown RBP18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 GIMAP7Q8NHV1 300 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 SLC22A18Q96BI1 424 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 ACSS3Q9H6R3 686 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 SATB2Q9UPW6 733 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 LOXL2Q9Y4K0 774 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 PCDHGA8Q9Y5G5 932 aa18.2■□□□□ 0.5
CYSTM1-201ENST00000261811 PIPSLA2A3N6 862 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 TLCD2A6NGC4 264 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 CXorf49A8MYA2 514 aaPredicted RBP18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 SNRNP200O75643 2136 aaKnown RBP18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 C8GP07360 202 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 CYP2A7P20853 494 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 HSD17B2P37059 387 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 PMS2P54278 862 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 TMEM164Q5U3C3 297 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 FAM92BQ6ZTR7 304 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 PRSS42Q7Z5A4 293 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 MARCH9Q86YJ5 346 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 CNPY4Q8N129 248 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 EEF1AKMT1Q8WVE0 214 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 LINGO1Q96FE5 620 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 SLC30A3Q99726 388 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 TRIM54Q9BYV2 358 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 TMEM9Q9P0T7 183 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 SPATA7Q9P0W8 599 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 ICKQ9UPZ9 632 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 NFS1Q9Y697 457 aa18.19■□□□□ 0.5
CYSTM1-201ENST00000261811 RASGRF2O14827 1237 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 SLC16A5O15375 505 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 HIST1H2AGP0C0S8 130 aaPredicted RBP18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 STMN1P16949 149 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 HIST1H2ADP20671 130 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 CDH3P22223 829 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 GFERP55789 205 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 SP140Q13342 867 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 USP10Q14694 798 aaKnown RBP18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 UAP1Q16222 522 aaPredicted RBP18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 UBE2R2Q712K3 238 aaPredicted RBP18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 ARHGAP22Q7Z5H3 698 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 KMT5CQ86Y97 462 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 FBXO15Q8NCQ5 510 aaPredicted RBP18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 RCBTB1Q8NDN9 531 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 MCOLN3Q8TDD5 553 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 ASB11Q8WXH4 323 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 HIST1H2AHQ96KK5 128 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 HIST1H2AJQ99878 128 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 CCDC77Q9BR77 488 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 H2AFJQ9BTM1 129 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 FUT8Q9BYC5 575 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 XKR8Q9H6D3 395 aa18.18■□□□□ 0.5
CYSTM1-201ENST00000261811 CCDC86Q9H6F5 360 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms