RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 MAN1A2O60476 641 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 SEC14L2O76054 403 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 BCKDHAP12694 445 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 PFKLP17858 780 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 BMXP51813 675 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 PLA2G16P53816 162 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 PPP2R2BQ00005 443 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 SMARCB1Q12824 385 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 LAIR2Q6ISS4 152 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 CERS6Q6ZMG9 384 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 CHDHQ8NE62 594 aaPredicted RBP16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 VN1R3Q9BXE9 311 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 STARD7Q9NQZ5 370 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 CRLS1Q9UJA2 301 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 FBXO10Q9UK96 956 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 CORINQ9Y5Q5 1042 aa16.01■□□□□ 0.15
TM9SF1-201ENST00000261789 MANBAO00462 879 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 BNIP3LO60238 219 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 NOL3O60936 208 aaKnown RBP16■□□□□ 0.15
TM9SF1-201ENST00000261789 ABCB7O75027 752 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 XYLBO75191 536 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 LRATO95237 230 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 SERPINA1P01009 418 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 INHBBP09529 407 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 DGKAP23743 735 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 ACRV1P26436 265 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 TUFMP49411 452 aaKnown RBP16■□□□□ 0.15
TM9SF1-201ENST00000261789 CD47Q08722 323 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 CDH18Q13634 790 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 CBX2Q14781 532 aaPredicted RBP16■□□□□ 0.15
TM9SF1-201ENST00000261789 RUNDC3AQ59EK9 446 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 LDLRAP1Q5SW96 308 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 GPRC6AQ5T6X5 926 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 CACHD1Q5VU97 1274 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 SLC8B1Q6J4K2 584 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 DET1Q7L5Y6 550 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 SNX20Q7Z614 316 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 ZSWIM9Q86XI8 627 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 SMYD1Q8NB12 490 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 C2orf15Q8WU43 125 aaKnown RBP16■□□□□ 0.15
TM9SF1-201ENST00000261789 CLMPQ9H6B4 373 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 CLEC4EQ9ULY5 219 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 OR51B4Q9Y5P0 310 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 THSD7BQ9C0I4 1608 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 UPK3BL1B0FP48 263 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 UPK3BL2E5RIL1 263 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 K7EPI3 171 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 IFRD1O00458 451 aaPredicted RBP16■□□□□ 0.15
TM9SF1-201ENST00000261789 E2F6O75461 281 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 CREG1O75629 220 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 ZBTB11O95625 1053 aaPredicted RBP16■□□□□ 0.15
TM9SF1-201ENST00000261789 TACR1P25103 407 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 CDKN2CP42773 168 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 TM4SF4P48230 202 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 GRSF1Q12849 480 aaKnown RBP eCLIP16■□□□□ 0.15
TM9SF1-201ENST00000261789 SPIDRQ14159 915 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 DPY19L1Q2PZI1 675 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 ZXDCQ2QGD7 858 aaPredicted RBP16■□□□□ 0.15
TM9SF1-201ENST00000261789 USP39Q53GS9 565 aaKnown RBP16■□□□□ 0.15
TM9SF1-201ENST00000261789 INO80DQ53TQ3 878 aaPredicted RBP16■□□□□ 0.15
TM9SF1-201ENST00000261789 C6orf141Q5SZD1 244 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 Q6ZNX1 250 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 RFLNAQ6ZTI6 216 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 RNF175Q8N4F7 328 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 PNPT1Q8TCS8 783 aaKnown RBP16■□□□□ 0.15
TM9SF1-201ENST00000261789 PYCR2Q96C36 320 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 TSSK3Q96PN8 268 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 ACPTQ9BZG2 426 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 KAT8Q9H7Z6 458 aaKnown RBP16■□□□□ 0.15
TM9SF1-201ENST00000261789 WARS2Q9UGM6 360 aaKnown RBP16■□□□□ 0.15
TM9SF1-201ENST00000261789 DGKBQ9Y6T7 804 aa16■□□□□ 0.15
TM9SF1-201ENST00000261789 TRIM64BA6NI03 449 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 PDYNP01213 254 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 EPB42P16452 691 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 EPORP19235 508 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 ITGALP20701 1170 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 FSHRP23945 695 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 C21orf59P57076 290 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 VAC14Q08AM6 782 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 ELAVL2Q12926 359 aaKnown RBP15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 ZNF829Q3KNS6 432 aaPredicted RBP15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 TRIM46Q7Z4K8 759 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 GALNT5Q7Z7M9 940 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 GALNT10Q86SR1 603 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 PLEKHA8Q96JA3 519 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 EGLN2Q96KS0 407 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 BARD1Q99728 777 aaKnown RBP15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 TUBA1CQ9BQE3 449 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 CLSTN3Q9BQT9 956 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 RETREG1Q9H6L5 497 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 PAK1IP1Q9NWT1 392 aaPredicted RBP15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 MBD1Q9UIS9 605 aaPredicted RBP15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 PDE10AQ9Y233 779 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 GLYATL1P3A0A0U1RQE8 302 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 SLC28A1O00337 649 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 MITFO75030 526 aaPredicted RBP15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 TRBC1P01850 177 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 IL6P05231 212 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 SELPP16109 830 aa15.99■□□□□ 0.15
TM9SF1-201ENST00000261789 DCTP40126 519 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms