RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 MMP27Q9H306 513 aa10.58□□□□□ -0.71
SLC6A4-201ENST00000261707 TMPRSS4Q9NRS4 437 aa10.58□□□□□ -0.71
SLC6A4-201ENST00000261707 SIRPGQ9P1W8 387 aa10.58□□□□□ -0.71
SLC6A4-201ENST00000261707 TRAV6A0A075B6T7 132 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 TRIM64BA6NI03 449 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 OC90Q02509 493 aaPredicted RBP10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 KLF1Q13351 362 aaPredicted RBP10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 IFI44LQ53G44 452 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 ZPBP2Q6X784 338 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 RTL4Q6ZR62 310 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 ZNF627Q7L945 461 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 PAQR7Q86WK9 346 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 ZNF34Q8IZ26 560 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 CYP2W1Q8TAV3 490 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 TRUB1Q8WWH5 349 aaKnown RBP10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 SLC38A4Q969I6 547 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 TMEM203Q969S6 136 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 DPCDQ9BVM2 203 aaPredicted RBP10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 GATA5Q9BWX5 397 aaPredicted RBP10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 LGR4Q9BXB1 951 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 STRADBQ9C0K7 418 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 AMBNQ9NP70 447 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 RIMKLBQ9ULI2 386 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 ZNF780BQ9Y6R6 833 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 CLEC3AO75596 197 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 LAG3P18627 525 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 MC1RQ01726 317 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 LRRC32Q14392 662 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 SLC30A10Q6XR72 485 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 C8orf48Q96LL4 319 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 MCMBPQ9BTE3 642 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 SLA2Q9H6Q3 261 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 SACM1LQ9NTJ5 587 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 OR1I1O60431 355 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 PGAM2P15259 253 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 KCNA5P22460 613 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 PSMD8P48556 350 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 ABRQ12979 859 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 MEP1AQ16819 746 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 DNAJC19Q96DA6 116 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 HCN2Q9UL51 889 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 FUOMA2VDF0 154 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 HCN1O60741 890 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 ZNF3P17036 446 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 PVALBP20472 110 aaPredicted RBP10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 TCEA1P23193 301 aaKnown RBP10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 MC4RP32245 332 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 RFTN2Q52LD8 501 aaPredicted RBP10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 OR14C36Q8NHC7 312 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 HSPA12BQ96MM6 686 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 SLC38A3Q99624 504 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 TIGARQ9NQ88 270 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 C1orf109Q9NX04 203 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 FETUBQ9UGM5 382 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 CSN2P05814 226 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 SERPINA4P29622 427 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 S100A10P60903 97 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 LCP2Q13094 533 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 EMID1Q96A84 441 aaPredicted RBP10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 BCO2Q9BYV7 579 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 ZYG11BQ9C0D3 744 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 RNF121Q9H920 327 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 TAS2R9Q9NYW1 312 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 KCNIP3Q9Y2W7 256 aa10.58□□□□□ -0.72
SLC6A4-201ENST00000261707 DAPL1A0PJW8 107 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 C9J4A7 227 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 INMT-MINDY4F8WBC2 141 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 SCN2BO60939 215 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 RFPL2O75678 378 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 MYCLP1P12525 358 aaPredicted RBP10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 DNAJA1P31689 397 aaKnown RBP10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 PPP3R1P63098 170 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 GPM6BQ13491 265 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 NETO2Q8NC67 525 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 CCDC120Q96HB5 630 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 PRMT6Q96LA8 375 aaPredicted RBP10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 ATG10Q9H0Y0 220 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 NRXN1Q9ULB1 1477 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 ADCY10Q96PN6 1610 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 LAMTOR5O43504 91 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 SPARCP09486 303 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 HTR2AP28223 471 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 ASMTP46597 345 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 CASP9P55211 416 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 SNRPD1P62314 119 aaKnown RBP10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 CXCL9Q07325 125 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 PGM5Q15124 567 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 UBAP2Q5T6F2 1119 aaKnown RBP10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 VASH1Q7L8A9 365 aaPredicted RBP10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 FAM129CQ86XR2 697 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 DENND1CQ8IV53 801 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 SDR16C5Q8N3Y7 309 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 KAT2AQ92830 837 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 MAELQ96JY0 434 aaKnown RBP10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 LRRC3Q9BY71 257 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 ZNF700Q9H0M5 742 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 LRRC72A6NJI9 287 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 MAGEB17A8MXT2 336 aa10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 SMAD9O15198 467 aaKnown RBP10.57□□□□□ -0.72
SLC6A4-201ENST00000261707 PIRTP0C851 137 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms