RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 FNIP2Q9P278 1114 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 VPS4AQ9UN37 437 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 TMEM247A6NEH6 219 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 H0YAE9 185 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 CXCR6O00574 342 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 FFAR2O15552 330 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 SH3BGRLO75368 114 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 CLPXO76031 633 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 EOMESO95936 686 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 EFNA1P20827 205 aaPredicted RBP14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 RXRGP48443 463 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 SGSHP51688 502 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 FPGSQ05932 587 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 CTU2Q2VPK5 515 aaKnown RBP14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 XAF1Q6GPH4 301 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 RIMKLAQ8IXN7 391 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 FAM120BQ96EK7 910 aaKnown RBP14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 PSKH2Q96QS6 385 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 ZNF382Q96SR6 550 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 CLPBQ9H078 707 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 PNMA8BQ9ULN7 279 aaPredicted RBP14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 ORC6Q9Y5N6 252 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 M0R3G1 203 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 LSM1O15116 133 aaKnown RBP14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 BCAS1O75363 584 aaPredicted RBP14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 ULK1O75385 1050 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 GGT1P19440 569 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 CDH3P22223 829 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 IRAK1BP1Q5VVH5 260 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 RNF19BQ6ZMZ0 732 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 TMEM179BQ7Z7N9 219 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 NPAS4Q8IUM7 802 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 TERB1Q8NA31 727 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 LEMD2Q8NC56 503 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 PAPD5Q8NDF8 572 aaKnown RBP14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 RAB2BQ8WUD1 216 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 TRIB3Q96RU7 358 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 NODALQ96S42 347 aa14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 ZNF490Q9ULM2 529 aaPredicted RBP14.19□□□□□ -0.14
SFSWAP-201ENST00000261674 DRGXA6NNA5 263 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 TULP3O75386 442 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 SERPINA1P01009 418 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 TIMP1P01033 207 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 C7P10643 843 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 PSMB9P28065 219 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 GKP32189 559 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 NEK2P51955 445 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 PAGE2BQ5JRK9 111 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 IGFN1Q86VF2 1251 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 CHDHQ8NE62 594 aaPredicted RBP14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 ABHD11Q8NFV4 315 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 C8orf48Q96LL4 319 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 ADGRE3Q9BY15 652 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 FCF1Q9Y324 198 aaKnown RBP14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 OR7A17O14581 309 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 PRMT5O14744 637 aaPredicted RBP14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 ACSL4O60488 711 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 SLC25A14O95258 325 aaPredicted RBP14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 HTR1BP28222 390 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 MAP2K4P45985 399 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 MAPKAPK2P49137 400 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 TAF12Q16514 161 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 CARTPTQ16568 116 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 SLCO6A1Q86UG4 719 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 RBM12BQ8IXT5 1001 aaKnown RBP14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 EID3Q8N140 333 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 TADA1Q96BN2 335 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 FEM1AQ9BSK4 669 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 RASSF1Q9NS23 344 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 DNAJB9Q9UBS3 223 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 BLOC1S6Q9UL45 172 aa14.18□□□□□ -0.14
SFSWAP-201ENST00000261674 LOC100130705A0A1B0GUX0 176 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 A0A1W2PQ67 120 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 OTCP00480 354 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 PGRP06401 933 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 PFKLP17858 780 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 OR1D2P34982 312 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 ATP5C1P36542 298 aaKnown RBP14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 SLC11A2P49281 568 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 BCAP31P51572 246 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 TMBIM6P55061 237 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 GRIK2Q13002 908 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 AQP6Q13520 282 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 SKIV2LQ15477 1246 aaKnown RBP14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 PHKG1Q16816 387 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 FUT10Q6P4F1 479 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 CARNMT1Q8N4J0 409 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 UROC1Q96N76 676 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 MGME1Q9BQP7 344 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 ASB8Q9H765 288 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 C8orf4Q9NR00 106 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 SLC6A13Q9NSD5 602 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 OLA1Q9NTK5 396 aaKnown RBP14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 OPTCQ9UBM4 332 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 VPS9D1Q9Y2B5 631 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 DOCK4Q8N1I0 1966 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 RAD51BO15315 384 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 ZNF12P17014 697 aa14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 WDR5P61964 334 aaKnown RBP14.17□□□□□ -0.14
SFSWAP-201ENST00000261674 FAM189BP81408 668 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms