RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 TTMPQ5BVD1 217 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CMPK2Q5EBM0 449 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TBC1D3GQ6DHY5 549 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TBC1D3CQ6IPX1 549 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 SERPINA9Q86WD7 417 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TBC1D3Q8IZP1 549 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 KLHL6Q8WZ60 621 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 AARSD1Q9BTE6 412 aaKnown RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 STRADBQ9C0K7 418 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 POLR2J2Q9GZM3 115 aaKnown RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 HDHD2Q9H0R4 259 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 POLR2J3Q9H1A7 115 aaKnown RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 SRMSQ9H3Y6 488 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 H0YAE9 185 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 NUDT14O95848 222 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 C8BP07358 591 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 MMP2P08253 660 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 KLF10Q13118 480 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 LDLRAD1Q5T700 205 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 PYHIN1Q6K0P9 492 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF730Q6ZMV8 503 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ARL10Q8N8L6 244 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 NAT8LQ8N9F0 302 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 LGMNQ99538 433 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 IL12RB2Q99665 862 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ALG2Q9H553 416 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 SIX2Q9NPC8 291 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TMPRSS4Q9NRS4 437 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TIMM13Q9Y5L4 95 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 GMEB1Q9Y692 573 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 AIREO43918 545 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CCNB2O95067 398 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 PGK1P00558 417 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 RENP00797 406 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 NTRK1P04629 796 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ATP1A4Q13733 1029 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 GRIN3AQ8TCU5 1115 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 HASPINQ8TF76 798 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 NCSTNQ92542 709 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 COX4I2Q96KJ9 171 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 PGLYRP2Q96PD5 576 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 MGME1Q9BQP7 344 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CHRNB2P17787 502 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CSNK2A2P19784 350 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CFL1P23528 166 aaKnown RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 DNAJA1P31689 397 aaKnown RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 CBX5P45973 191 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 GCNT7Q6ZNI0 430 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 TAC4Q86UU9 113 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 EFCAB3Q8N7B9 438 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 RASGEF1AQ8N9B8 481 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 C2CD4AQ8NCU7 369 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF717Q9BY31 904 aaPredicted RBP4.24□□□□□ -1.73
VPS13C-202ENST00000261517 LTBP4Q8N2S1 1624 aa4.24□□□□□ -1.73
VPS13C-202ENST00000261517 ISM1B1AKI9 464 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 KIAA0355O15063 1070 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 FAM153BP0C7A2 387 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 DRD2P14416 443 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF3P17036 446 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 PTDSS1P48651 473 aaKnown RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 KCNC4Q03721 635 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 EMX2Q04743 252 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 LRP8Q14114 963 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ELAVL3Q14576 367 aaKnown RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 QPRTQ15274 297 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 PPP2R2DQ66LE6 453 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ADNP2Q6IQ32 1131 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 USP43Q70EL4 1123 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 FAM210AQ96ND0 272 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ZNF879B4DU55 563 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 PHYHO14832 338 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 NDUFB5O43674 189 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 IL12BP29460 328 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 TRA2BP62995 288 aaKnown RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 PWP1Q13610 501 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 PDK3Q15120 406 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 FAM214AQ32MH5 1076 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 LLGL2Q6P1M3 1020 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 FLCNQ8NFG4 579 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 SLC13A3Q8WWT9 602 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ELMO3Q96BJ8 720 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ZDHHC12Q96GR4 267 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 HS6ST2Q96MM7 605 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 DSN1Q9H410 356 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 BRF2Q9HAW0 419 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 MKKSQ9NPJ1 570 aaPredicted RBP4.23□□□□□ -1.73
VPS13C-202ENST00000261517 RBPJLQ9UBG7 517 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 VPS29Q9UBQ0 182 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 SFMBT1Q9UHJ3 866 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 YIPF1Q9Y548 306 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 TEX264Q9Y6I9 313 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 MAGEA6P43360 314 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 GYS2P54840 703 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 ABHD18Q0P651 414 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 MS4A13Q5J8X5 152 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 STEAP4Q687X5 459 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 PIGWQ7Z7B1 504 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 PLCZ1Q86YW0 608 aa4.23□□□□□ -1.73
VPS13C-202ENST00000261517 GID4Q8IVV7 300 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms