RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 KCNK9Q9NPC2 374 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 UTP6Q9NYH9 597 aaKnown RBP15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 CIDEBQ9UHD4 219 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 RNF112Q9ULX5 631 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 PLLPQ9Y342 182 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 OARD1Q9Y530 152 aa15.39■□□□□ 0.05
CCDC90B-201ENST00000260054 TARM1B6A8C7 271 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 TRIM38O00635 465 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 PRPF4O43172 522 aaKnown RBP eCLIP15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 PLIN3O60664 434 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 PROCP04070 461 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 HPDP32754 393 aaPredicted RBP15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 KPNA2P52292 529 aaKnown RBP15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 PRKG2Q13237 762 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 GRB7Q14451 532 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 TGFBIQ15582 683 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 PRR23CQ6ZRP0 262 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 DCUN1D3Q8IWE4 304 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 KYQ8NBH2 561 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 FBXO15Q8NCQ5 510 aaPredicted RBP15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 MAPK15Q8TD08 544 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 HGH1Q9BTY7 390 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 IQCGQ9H095 443 aaKnown RBP15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 MRPL46Q9H2W6 279 aaKnown RBP15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 TRIT1Q9H3H1 467 aaKnown RBP15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 MVB12BQ9H7P6 319 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 CPNE7Q9UBL6 633 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 HEBP2Q9Y5Z4 205 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 TMEM120BA0PK00 339 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 RPN2P04844 631 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 ENO2P09104 434 aaPredicted RBP15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 TPBGLP0DKB5 382 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 MTHFD2P13995 350 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 CYP2A7P20853 494 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 RPIAP49247 311 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 GPS2Q13227 327 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 MBOAT1Q6ZNC8 495 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 FRA10AC1Q70Z53 315 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 ASCL5Q7RTU5 278 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 SLC9B2Q86UD5 537 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 GPSM1Q86YR5 675 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 SLC35F3Q8IY50 421 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 ARL14Q8N4G2 192 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 ARL10Q8N8L6 244 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 EXT2Q93063 718 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 FAM111AQ96PZ2 611 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 PKP4Q99569 1192 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 NRTNQ99748 197 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 DUSP23Q9BVJ7 150 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 RDH14Q9HBH5 336 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 SLC40A1Q9NP59 571 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 POT1Q9NUX5 634 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 PLAGL1Q9UM63 463 aa15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 TDRKHQ9Y2W6 561 aaKnown RBP15.38■□□□□ 0.05
CCDC90B-201ENST00000260054 CCDC189A1A4V9 331 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 UBXN8O00124 270 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 MYO1CO00159 1063 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 SIGLEC6O43699 453 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 GUCA1CO95843 209 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 VIPP01282 170 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 ALPPL2P10696 532 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 MAP4P27816 1152 aaKnown RBP15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 ETV4P43268 484 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 HHEXQ03014 270 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 KRT33BQ14525 404 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 CCDC153Q494R4 210 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 C14orf28Q4W4Y0 310 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 ZCCHC8Q6NZY4 707 aaKnown RBP15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 DBX2Q6ZNG2 339 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 TRIM48Q8IWZ4 208 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 EID2Q8N6I1 236 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 ARMC2Q8NEN0 867 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 MCOLN3Q8TDD5 553 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 RAD51AP1Q96B01 352 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 CAMK1GQ96NX5 476 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 SELENOSQ9BQE4 189 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 KIR3DX1Q9H7L2 352 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 BTBD3Q9Y2F9 522 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 PCDHGB2Q9Y5G2 931 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 COLEC10Q9Y6Z7 277 aa15.37■□□□□ 0.05
CCDC90B-201ENST00000260054 ANKRD12Q6UB98 2062 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 NCF1BA6NI72 391 aaPredicted RBP15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 NCF1CA8MVU1 366 aaPredicted RBP15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 PPM1DO15297 605 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 HIST1H2AGP0C0S8 130 aaPredicted RBP15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 MYF5P13349 255 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 NCF1P14598 390 aaPredicted RBP15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 HIST1H2ADP20671 130 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 NDUFS1P28331 727 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 FASLGP48023 281 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 GPR18Q14330 331 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 AASDHQ4L235 1098 aaPredicted RBP15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 TTC23LQ6PF05 361 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 ANKRD42Q8N9B4 389 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 OR52E1Q8NGJ3 308 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 MAGEC3Q8TD91 643 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 DENND1AQ8TEH3 1009 aa15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 JPH3Q8WXH2 748 aaPredicted RBP15.36■□□□□ 0.05
CCDC90B-201ENST00000260054 HIST1H2AHQ96KK5 128 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms