RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 SH3BP2P78314 561 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 CTBSQ01459 385 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 LCP2Q13094 533 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 LRP8Q14114 963 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 PTK2BQ14289 1009 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 DUS1LQ6P1R4 473 aaKnown RBP17.29■□□□□ 0.36
CCDC115-201ENST00000259229 GOLGA7Q7Z5G4 137 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 TCAIMQ8N3R3 496 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 MFSD2AQ8NA29 543 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 OR5AR1Q8NGP9 310 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 AGR3Q8TD06 166 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 TRPC4APQ8TEL6 797 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 AGAP11Q8TF27 550 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 TFGQ92734 400 aaPredicted RBP17.29■□□□□ 0.36
CCDC115-201ENST00000259229 KLHDC7BQ96G42 594 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 TRIM54Q9BYV2 358 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 TRIM55Q9BYV6 548 aa17.29■□□□□ 0.36
CCDC115-201ENST00000259229 ILKAPQ9H0C8 392 aaPredicted RBP17.29■□□□□ 0.36
CCDC115-201ENST00000259229 TRNAU1APQ9NX07 287 aaKnown RBP17.29■□□□□ 0.36
CCDC115-201ENST00000259229 STOX2Q9P2F5 926 aaPredicted RBP17.29■□□□□ 0.36
CCDC115-201ENST00000259229 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.29■□□□□ 0.36
CCDC115-201ENST00000259229 CFAP20Q9Y6A4 193 aaKnown RBP17.29■□□□□ 0.36
CCDC115-201ENST00000259229 USP34Q70CQ2 3546 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 OR7A17O14581 309 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 SLC16A8O95907 504 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 HIST1H2AGP0C0S8 130 aaPredicted RBP17.28■□□□□ 0.36
CCDC115-201ENST00000259229 SLC35G4P0C7Q5 338 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 HIST1H2ADP20671 130 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 MAP4P27816 1152 aaKnown RBP17.28■□□□□ 0.36
CCDC115-201ENST00000259229 CD38P28907 300 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 PRDX3P30048 256 aaKnown RBP17.28■□□□□ 0.36
CCDC115-201ENST00000259229 HNMTP50135 292 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 NAA20P61599 178 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 CLCA4Q14CN2 919 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 METTL2BQ6P1Q9 378 aaKnown RBP17.28■□□□□ 0.36
CCDC115-201ENST00000259229 RD3Q7Z3Z2 195 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 IQCHQ86VS3 1027 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 LONP2Q86WA8 852 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 SPATS2Q86XZ4 545 aaKnown RBP17.28■□□□□ 0.36
CCDC115-201ENST00000259229 HID1Q8IV36 788 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 KLHDC8AQ8IYD2 350 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 HIST1H2AHQ96KK5 128 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 CCDC138Q96M89 665 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 INSM2Q96T92 566 aaPredicted RBP17.28■□□□□ 0.36
CCDC115-201ENST00000259229 HIST1H2AJQ99878 128 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 H2AFJQ9BTM1 129 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 MENTQ9BUN1 341 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 SEMA4BQ9NPR2 832 aaPredicted RBP17.28■□□□□ 0.36
CCDC115-201ENST00000259229 PRDM8Q9NQV8 689 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 SCHIP1Q9P0W5 487 aaPredicted RBP17.28■□□□□ 0.36
CCDC115-201ENST00000259229 TBC1D29Q9UFV1 150 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 DCTN4Q9UJW0 460 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 ASF1AQ9Y294 204 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 USH1CQ9Y6N9 552 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 NCOR1O75376 2440 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 KMT2EQ8IZD2 1858 aa17.28■□□□□ 0.36
CCDC115-201ENST00000259229 A6NCN8 305 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 MATN2O00339 956 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 DLL1O00548 723 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 RASGRP1O95267 797 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 JUNP05412 331 aaKnown RBP17.27■□□□□ 0.36
CCDC115-201ENST00000259229 RPL14P50914 215 aaKnown RBP17.27■□□□□ 0.36
CCDC115-201ENST00000259229 SRSF5Q13243 272 aaKnown RBP17.27■□□□□ 0.36
CCDC115-201ENST00000259229 TCEA2Q15560 299 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 PTCHD3Q3KNS1 767 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 SH2D4BQ5SQS7 431 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 FOXR1Q6PIV2 292 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 ARMCX6Q7L4S7 300 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 PARGQ86W56 976 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 DCUN1D3Q8IWE4 304 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 PHC3Q8NDX5 983 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 OR52B6Q8NGF0 335 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 OR5K2Q8NHB8 316 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 MAPK15Q8TD08 544 aa17.27■□□□□ 0.36
CCDC115-201ENST00000259229 TTC28Q96AY4 2481 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 K7EPI3 171 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 MAP3K13O43283 966 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 CCNT2O60583 730 aaKnown RBP17.26■□□□□ 0.35
CCDC115-201ENST00000259229 GPR37L1O60883 481 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 STK16O75716 305 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 IDSP22304 550 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 FOXA1P55317 472 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 CSTF1Q05048 431 aaKnown RBP17.26■□□□□ 0.35
CCDC115-201ENST00000259229 TRAF3Q13114 568 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 GTF2H2Q13888 395 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 UAP1L1Q3KQV9 507 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 ZNF542PQ5EBM4 170 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 GTF2H2CQ6P1K8 395 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 AGTRAPQ6RW13 159 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 SYVN1Q86TM6 617 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 WDR75Q8IWA0 830 aaKnown RBP17.26■□□□□ 0.35
CCDC115-201ENST00000259229 LRRC56Q8IYG6 542 aaPredicted RBP17.26■□□□□ 0.35
CCDC115-201ENST00000259229 CACNA2D3Q8IZS8 1091 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 DTWD2Q8NBA8 298 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 CCDC197Q8NCU1 140 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 GPBAR1Q8TDU6 330 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 ZNF480Q8WV37 535 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 PYCR2Q96C36 320 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 C12orf66Q96MD2 445 aa17.26■□□□□ 0.35
CCDC115-201ENST00000259229 ZNF382Q96SR6 550 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms